Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0651 ATGAACAAAAATGGCGTCATTCCGTGGATGAGGCAGCAATGGCGGGGCATAGTGAAAGTGCGTTTGAAATGGGTGAAGAACCGAAGCCTCGATCACGTCATCGACAAGGAAACCGATCTCAAAGCGGCCTGTCTCCTGAAAGACGCTATCAATCGCTCTTCCACCGCCTTCCTCACGGCGAAATCCGTTGCAGACTGGCAGAAGCTCCTCGGCCTCACCGTTCCCGTTCTCCGCTTCCTCCGCCGCTACCCCACCCTCTTCCAAGAGTTCCCGCACCCGCGCTGGCCCTCCCTCCCCTGCTTCCGCCTCACTGACACTGCACTTTTTCTCCACTCCCAGGAACTCGCACTCCACCAAGCTCACCAAAACAACGCAGTCGAACGCCTCTCCAAGCTCCTCATGATGACCCGCTCACGCGCCCTGCCCCTCTGTTCCCTCCACTCGCTCAAGTGGGACCTCGGCTTACCCGACTCCTTCGAGAAAACCCTCGTCCCCAACTTCCCTAACGACTTCCAGTTTGTCAAGTCCAACGGCGTCGTTTCGCTCAAACTAGCACGATGGCCTGAGGAATTCGCTGTGTCCGCGCTGCAACAGAGAAACGAGTGTGGGACCCACTACCGGGAATTCAAGCGGGGACAATCGGCATTGGCTTTCCCGATGAAGTTTCCCAGGGGTTACGGCGCGCAGAAGAAGGTGAGGACGTGGATGGAGGAGTTTCAGAAGCTGCCTTATGTTTCTCCCTATGTTGATTCCTCCAAGATTGATCCCAACAGCGATTTGATGGAGAAGCGCGTGGTTGGGGTTCTGCACGAGCTTTTGAGTTTAACTCTGCACAAGAAAACAAAGAGGAACTACTTGAGGAGCTTGAGGGAAGAGTTGAATCTTCCGCACAAGTTTACCCGGATTTTCACTCGGTATCCCGGCATCTTTTACCTCTCACTGAAGTGTAAAACGACCACTATTACTCTCAGGGAAGGGTACCAGAGTGGGAAACTGGTTGACCCCCACCCTCTTGTCCGACATAGAGATAAATTCTACCGTGTCATGCAGACGGGGCTTCTCTATCGCGGGGATGGGTCATTGAATCACGACGGCAACAATTCGTTGGTCGAGAATGATGAGCTAAGAAGTGAGGAATCCGGGGAGGAAGAGGTTGAAACGAGTGATGAATTATCTGAGGGTGAATCGAGTGATGAACTCTGCGAGGGTGAAGAGTGA 1218 0.5369 MNKNGVIPWMRQQWRGIVKVRLKWVKNRSLDHVIDKETDLKAACLLKDAINRSSTAFLTAKSVADWQKLLGLTVPVLRFLRRYPTLFQEFPHPRWPSLPCFRLTDTALFLHSQELALHQAHQNNAVERLSKLLMMTRSRALPLCSLHSLKWDLGLPDSFEKTLVPNFPNDFQFVKSNGVVSLKLARWPEEFAVSALQQRNECGTHYREFKRGQSALAFPMKFPRGYGAQKKVRTWMEEFQKLPYVSPYVDSSKIDPNSDLMEKRVVGVLHELLSLTLHKKTKRNYLRSLREELNLPHKFTRIFTRYPGIFYLSLKCKTTTITLREGYQSGKLVDPHPLVRHRDKFYRVMQTGLLYRGDGSLNHDGNNSLVENDELRSEESGEEEVETSDELSEGESSDELCEGEE* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0651 405 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 10 402 IPR045040 GO:0003723
Vra3g0651 405 MobiDBLite consensus disorder prediction 376 405 - -
Vra3g0651 405 Pfam Plant organelle RNA recognition domain 25 352 IPR021099 GO:0003723
Vra3g0651 405 MobiDBLite consensus disorder prediction 357 405 - -
Vra3g0651 405 PANTHER OS04G0546100 PROTEIN 10 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0651 Vra-Chr3 7037858 7042611 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0651 - - vun:114164383 736.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0651 3 7037858 7042611 Vra3g0651 3 7037858 7042611 ECH
Vra3g0651 3 7037858 7042611 Vra8g1159 8 26597191 26599842 PCT