Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0574 ATGTATATATATTGTAAGTGGCAAGCAACCAAGTCATTGCCTCAAACTAAGGACACTATGGCTTGCACCGATAACACAACCGCCGCCATCCACCGACCAGGCGCTGCCACCACCATCTCCGCCGTGCATCCCGACATAATTCAAACCCACATCCTCACGCGCCTCGACGGCCCTGCGCTGGCTTCAATTGCCACCACCTGCTCCCAACTCCACGCCCTCTCGGAACACGAACAGCTCTGGGAGAGCATCTGCCATGCCACATGGCCCTCAACCACGACGCCACGCGTGCGCCACATAATCTCAACGTTCCCAGGCGCCTCTCGTTCTTTTTTCTCCGACTCCTTCCCTTCGTTTGCTGCTGTGGACACTTATCGCCACGCGAACATCGAGCGTACGCCGGAGCTTGTCACGGCTGTGGACCTGTTCCACGGGCGGAAGCCGGTGCTTTCGCGGGTGGTGGAGACGGAGACGGTCTCAGGGTGGTTCCGGTGCTCGCCGTTTAGAGTTGACGTGCTGGATCCGAAGGAGGCGGTGGCGACGGCGATGGAGTATCCGCGAAGCGAGGAAGCGTGCGAGAGGCTCCGGGAGGAGTTGAGGCTGAGCTGGATAGTGGTGGATCCCGAGGGGAAGCGCGCGGTGAACGTGTCGAGCGGTAGGGCGGTGTCCGTGGAGCGGCACTGGCTGAGTGGTGAGGTGCGGGTGCGGTTCGCGACGGTGGTGGGCGGCGGGGAGAGGGGTTCGGCATCGGAGGCTGTGCTGTGCAGCGTGACTGTGACTTGCGGGAGTGAGATGCAGGTGAGGGAAGCGTGTGTGCAGATGGAGGACATGGATGGAACGATCCTGAATGGGAGGGACAGTTTGGGGATTTTGCAAAGGGCGTTGGAGGGTAAAAGGGGAACATTTTTTGTGGCCGGAGAAAAGGATAGATTCTTGGAATTCATGAATCGAAAGAGGGAAAGAAAGGAAAGGAAAATGAGAGACGAAAGAAGGTTGGACATGGCCTGCGTGGCTCTCGCGCTTTTGTCCTTTGCGGCTATTTCCACACTCTTTTTCTTCCGAATATAA 1065 0.5803 MYIYCKWQATKSLPQTKDTMACTDNTTAAIHRPGAATTISAVHPDIIQTHILTRLDGPALASIATTCSQLHALSEHEQLWESICHATWPSTTTPRVRHIISTFPGASRSFFSDSFPSFAAVDTYRHANIERTPELVTAVDLFHGRKPVLSRVVETETVSGWFRCSPFRVDVLDPKEAVATAMEYPRSEEACERLREELRLSWIVVDPEGKRAVNVSSGRAVSVERHWLSGEVRVRFATVVGGGERGSASEAVLCSVTVTCGSEMQVREACVQMEDMDGTILNGRDSLGILQRALEGKRGTFFVAGEKDRFLEFMNRKRERKERKMRDERRLDMACVALALLSFAAISTLFFFRI* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0574 354 SUPERFAMILY F-box domain 44 105 IPR036047 GO:0005515
Vra3g0574 354 PANTHER OS12G0156500 PROTEIN 29 346 - -
Vra3g0574 354 PANTHER F-BOX PROTEIN-RELATED 29 346 IPR045283 -
Vra3g0574 354 Gene3D - 28 117 - -
Vra3g0574 354 Coils Coil 311 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0574 Vra-Chr3 6328378 6329914 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0574 - - vra:106757292 671.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0574 3 6328378 6329914 Vra3g0574 3 6328378 6329914 ECH
Vra8g1309 8 29002476 29004871 Vra3g0574 3 6328378 6329914 PCT