Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0094 ATGTCAGTGGCACCGGTTGAAAGTATTCCCACATTAAGCAGTGATCTCTTCTATGATATATTTCGTCGACTTGATGGTGCAACATTGGCCAGTGCAGCATGTACTTGTGCAACGTTGTGTTCCATCTCTAAAGAAGAGAGTTTATGGGAGAACGTATGTTCATCTATGTGGCCTTCAACGAATAGAGAGGATGTCAAAAGTTTGATATCTTCTATTGGTGGATTCCGGAAATTTTATGCAGACTGTTTCCCGATTGTTGTAAACAAGGAGGTTGTAGAGTATCAACCGAACAACTATCATGAGTACCCGGAGAATTGGACCGAAGCTGAGTATTATGGAGACATGAATGAATCGGAAAACATCTGTCCATCAGATTTTGTTTCTATAATAGATATTAGGTTCAAGGGAAAACCGGTCTGTTCCAAAGTTCTTTGGGGAATCCCAAATGCAAATAGCTATGATGGCTGGTTCTATAACTGCCCTTTCCGGATTGATTTTCTCACTTATGCAGATAGAGATGATAACAATGATGGATGTGTTTATCTTTCTGTATCTGATGGTCTGCCACGTGTTACATCCATGGAAAGGGAAAGGAAAGATGGGAAGCTATGGCGGGAGCTCTGCGAAGGGCTCCAGCTCAGTTGGATTATAGTAAACAAGAAAATGAAACAAGCTGCAAATCTTGCTAGCTGGAGCCCTCTTGGTGGACAACGACACTGGCCAACAGATAGGGATTTTGTGATCCGCTTTGGATCAGTTCTGCCTGCCAAGGACATTCTTCCTTGTCAAGTAGTGGAGTGTATTCTAATTATGAAGTTTAGAGTGGTTCATACCGAAGAAGAAGGGGTCGAAACAACCCTTAAATTAACAGAGCTGAGCATGCAGTTGGAAGACATGGAAGGTGCTCATGTTAATGGAAGAAACAGTTTGCATATACTGAAGGATGCACTTAGCAGCAGAAGGAGCAAAAACTACGGTGAAGTACTTGAGTCTTGCCACATGTATTCAAAAGTACAGAATGAGTTGAAAGAGGAGAAGATGAGAAATGAAAGTAGGTTGGATAGACTTTGTATTCTGAGTGGCATTGCGGCCTTTATGACGTTCTGGTACTGTGTTTTATAA 1122 0.4171 MSVAPVESIPTLSSDLFYDIFRRLDGATLASAACTCATLCSISKEESLWENVCSSMWPSTNREDVKSLISSIGGFRKFYADCFPIVVNKEVVEYQPNNYHEYPENWTEAEYYGDMNESENICPSDFVSIIDIRFKGKPVCSKVLWGIPNANSYDGWFYNCPFRIDFLTYADRDDNNDGCVYLSVSDGLPRVTSMERERKDGKLWRELCEGLQLSWIIVNKKMKQAANLASWSPLGGQRHWPTDRDFVIRFGSVLPAKDILPCQVVECILIMKFRVVHTEEEGVETTLKLTELSMQLEDMEGAHVNGRNSLHILKDALSSRRSKNYGEVLESCHMYSKVQNELKEEKMRNESRLDRLCILSGIAAFMTFWYCVL* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0094 373 Gene3D - 3 107 - -
Vra3g0094 373 SUPERFAMILY F-box domain 7 79 IPR036047 GO:0005515
Vra3g0094 373 PANTHER F-BOX PROTEIN-RELATED 4 369 - -
Vra3g0094 373 PANTHER F-BOX PROTEIN-RELATED 4 369 IPR045283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0094 Vra-Chr3 1003140 1006649 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0094 - - gmx:100500689 705.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0094 3 1003140 1006649 Vra3g0094 3 1003140 1006649 ECH
Vra3g0094 3 1003140 1006649 Vra8g1496 8 31890138 31893057 PCT