Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0090 ATGCCTCTTTCATCTCTCTGCAGCAGGTTATCGTTCTTATCCATCTCCCTCTTCTTGTCTCTAACACCAACACTCCAAATCCCCTTGGTAGCCCCAATCACAAAAGACCCTTCCACCCAACTCTACGCACTCTCCCTCTTCCTCAAAACCCCGCTCCAGCACACCACACTCCACCTCGACCTCGGTTCCTCCCTTACCTGGCTCCTCTGCGACTCCACCTATACCTCCTCCTCCTCCCACCACATCCCCTGCAACACCTCCCTATGCGACTCCTTCCCTGCTAACGCCTGTTCCAACGACACATGCGCCCTCTTCCCTGAAAACCCTCTCACAAGAACCACCCTTCTCGACACCGCCCTCATCGATTCTCTCGCCCTTCCAACCTACGACACCTCCTCTCAGAGCCCACTCGTTCTCATTTCCGATTTCATCTTCTCCTGCGCCGTCGCCCATTTGCTCCAAGGCCTCGCTACCAATGTCACCGGACTAGCCGCTTTGGGCCGGTCCAATAACTCTCTCCCGGCCCAAATAAGCATTGCATTGAGTTCCTCTCATTCTTTCTCTCTCTGCTTGCCTGCTTCCTCCAACACAGGCGCAGCTATCTTCGCCTCCACCTCCATCTCTTACTTTTTCTCTTCCAAAATTGACCTCACTTACACCCCACTCATTCTTAACCCCGTCGCCGACACTGTCGTCACCCACAACTCACAACCCTCCGACGAGTATTTCATAAACGTCACCTCCATCAAGATCAACGGCAAGGCTCTTCCCATCGACGCCTCCATCTTAACCGTTGATCAAACCGGCTTCGGTGGGACCAAGATCAGCACTGCGGAGCCCTACACAGTTTTGGAAAGTTCCATTTACAAACTCTTCGTCCGGTTTTTCGTCAACGAAGCCTCAGCTTTTAACTTAACGGTGACGGAGGCCGTTGAGCCCTTTGGCGTGTGCTACTCGGCGGGAGACCTCACGGAGACAAGGGTGGGACCCGCTGTTCCGACCGTTGATCTGGTGATGCACAGCGAGGAAGTGTTTTGGAGAATCTTCGGGGGGAATTCGATGGTGAGGATTGAAAAGGGAGGAGTGGATGTGTGGTGTTTGGGTTTCGTGGATGGTGGGATTCGTAGGAGGACGGCGGTTGTGATTGGAGGGCATCAAATGGAGGATAATTTAGTGCAGTTTGATCTTGACTCAAATAGATTTGGTTTCACCTCATCTCTGTTGCTCCAGGGTGCCAAGTGTGCTAATCTTAATTTCACTAATCTTACCAATTCCATTAATTAG 1284 0.5218 MPLSSLCSRLSFLSISLFLSLTPTLQIPLVAPITKDPSTQLYALSLFLKTPLQHTTLHLDLGSSLTWLLCDSTYTSSSSHHIPCNTSLCDSFPANACSNDTCALFPENPLTRTTLLDTALIDSLALPTYDTSSQSPLVLISDFIFSCAVAHLLQGLATNVTGLAALGRSNNSLPAQISIALSSSHSFSLCLPASSNTGAAIFASTSISYFFSSKIDLTYTPLILNPVADTVVTHNSQPSDEYFINVTSIKINGKALPIDASILTVDQTGFGGTKISTAEPYTVLESSIYKLFVRFFVNEASAFNLTVTEAVEPFGVCYSAGDLTETRVGPAVPTVDLVMHSEEVFWRIFGGNSMVRIEKGGVDVWCLGFVDGGIRRRTAVVIGGHQMEDNLVQFDLDSNRFGFTSSLLLQGAKCANLNFTNLTNSIN* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0090 427 PANTHER ASPARTYL PROTEASE-RELATED 13 419 IPR001461 GO:0004190|GO:0006508
Vra3g0090 427 Gene3D Acid Proteases 24 203 IPR021109 -
Vra3g0090 427 ProSiteProfiles Peptidase family A1 domain profile. 42 404 IPR033121 -
Vra3g0090 427 Pfam Xylanase inhibitor N-terminal 42 202 IPR032861 -
Vra3g0090 427 Pfam Xylanase inhibitor C-terminal 241 404 IPR032799 -
Vra3g0090 427 Gene3D Acid Proteases 207 421 IPR021109 -
Vra3g0090 427 PANTHER OS05G0403000 PROTEIN 13 419 - -
Vra3g0090 427 SUPERFAMILY Acid proteases 33 409 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0090 Vra-Chr3 975690 977258 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0090 - - pvu:PHAVU_001G149500g 733.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0090 3 975690 977258 Vra8g1147 8 26481229 26482800 PCT