Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1599 ATGAGGTGGGAAAAGGTAAAGGGAACAGGAGGAGAAGGACCAGGGAGGAGGTGGGGCCACACGTGTAACGCTGTTAGAGATGGCAGACTTCTTTATCTCTTCGGTGGTTACGGCAAATTTAACTGTCAGACCAACCAAGTTCACGTATTCGACACTCTGAGGCAGAGTTGGAGTGAACCAGCAATTAAAGGGACCCCACCTACTCCTAGGGACAGCCATAGTTGTTCTGTTGTTGGTGATAGTCTTTTTGTGTTTGGGGGTACAGATGGGACCAGGCTGCTGAATGATTTGCATATTCTAGACACTTCTTCACATACATGGATTTTTCCAACTGTGAGAGGGGAAGCACCAGAGGCACGGGAGGGTCATGCTGCTGCAGTTATTGGCAAACGACTATTTGTGTTTGGTGGTTGTGGGAGATCTGCAAATAATACTAATGATGTGTACTACAATGACCTTTACATATTAAATACAGAAACATATACATGGCAGCGTGCTACAACATCAGGCACTCCACCATCTCCTCGAGATAGCCACACTTGTTCATCTTGGAAAAACAAAATTATTGTGATCGGTGGTGAAGATGAACAAGATTATTATCTGTCTGATGTTCATGTTCTGGATACTGATACTCTTATCTGGAGCAAAATGTGTACGTCTAGCCAATCATTGCCACCTCGAGCTGGTCATTGTACAGTTTCTTTGGGCAACAGTTTGTTTGTTTTTGGGGGCTTTACAGAAGCCCAATGCCTGTACAATGACCTATATATGCTTGACATTGAGACTTTTGTATGGACGAAGGTGGAAACTACACCTAGTGGTCCTTCTGCTAGATTTTCTGTAGCTGGTGACTGTTTAGATCCACATATGGGTGGTGCTCTTGTGTTTTTGGGAGGTTGTAATAGAAATCTGGAGGCCCTGGATGACATGTATTACCTATACACAGGTATTGCACAGGAAAGAGAACTCAGACCAGAGAAGCTATCCTTACGGAAGCAATTGAAGCTGAAATGTCAAGAGCAGAATCTCAATCTTGTCCAAAACCCAGTTCTGTCTGGATATGGAGTGGATGCCGGCAGTAATCATCCTATGTCAATTTTAAACTATAGCCAACAAAGTAAACTAAATATCCCCGTAAGGCAACTCCTGTCTCCTGGAAAGAGAATGTTTCATGCCAAAGTTACGGAAAAAATCTCAGCAGGATATACTATTGAAACTGTTATTGATGGAAAGCCTCTTCATGGAATTCTGTTTTCAAACAAGCCAAACATTCAAAGTCCAGTTGCTAATACTTCCAATAGGAAAAGGTCTGCTGGTGAAATTGAAAATGTTGATTTAAATGACATGCTTACACAATCAGACAATGTAACAACTTCTGCAGTGCTCAGGCAAGAGAAAATGGAAAAGCAACCGGAAGTACGGGGAGAGAGTTCAGAATTTCTTGAACGCCATAAAGAAGCAGATACTATTGTTGCGTCAAGTATCCCAACAACAGCTGCGGAGTCCTTAAAGGATTCTGTCAACCCAGAACCTGAAGCTGTTTCTTTGAATCTAAATGATGAGAAAAATGACTCATCAAAACCCTTAATTGAGAGCTTGAAAAACGATGGATCCAATGATGAGACAAGTTCCAAAGGTGAAATGCAAATTGGAGATGAAATAAACGTGCCAGTTTCCAATTGTGAAATTTCAGGACAAATTAGTGATGCACCAAACTCTAATGCTGATGTCCTGAAACCTGCAGCAACTGAGAGTTCTGTTTCTCCTCCAAATCAAGGTGTGACAGATGATTGCACAACTCCAAGGACAGAAGGCCAAAGTGAACAAGAAAAATTAACATGA 1842 0.4197 MRWEKVKGTGGEGPGRRWGHTCNAVRDGRLLYLFGGYGKFNCQTNQVHVFDTLRQSWSEPAIKGTPPTPRDSHSCSVVGDSLFVFGGTDGTRLLNDLHILDTSSHTWIFPTVRGEAPEAREGHAAAVIGKRLFVFGGCGRSANNTNDVYYNDLYILNTETYTWQRATTSGTPPSPRDSHTCSSWKNKIIVIGGEDEQDYYLSDVHVLDTDTLIWSKMCTSSQSLPPRAGHCTVSLGNSLFVFGGFTEAQCLYNDLYMLDIETFVWTKVETTPSGPSARFSVAGDCLDPHMGGALVFLGGCNRNLEALDDMYYLYTGIAQERELRPEKLSLRKQLKLKCQEQNLNLVQNPVLSGYGVDAGSNHPMSILNYSQQSKLNIPVRQLLSPGKRMFHAKVTEKISAGYTIETVIDGKPLHGILFSNKPNIQSPVANTSNRKRSAGEIENVDLNDMLTQSDNVTTSAVLRQEKMEKQPEVRGESSEFLERHKEADTIVASSIPTTAAESLKDSVNPEPEAVSLNLNDEKNDSSKPLIESLKNDGSNDETSSKGEMQIGDEINVPVSNCEISGQISDAPNSNADVLKPAATESSVSPPNQGVTDDCTTPRTEGQSEQEKLT* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1599 613 MobiDBLite consensus disorder prediction 516 613 - -
Vra2g1599 613 SUPERFAMILY Kelch motif 114 314 IPR015915 GO:0005515
Vra2g1599 613 Pfam Galactose oxidase, central domain 175 225 - -
Vra2g1599 613 Pfam Galactose oxidase, central domain 17 67 - -
Vra2g1599 613 Pfam Galactose oxidase, central domain 226 273 - -
Vra2g1599 613 MobiDBLite consensus disorder prediction 559 607 - -
Vra2g1599 613 PANTHER KELCH REPEAT DOMAIN 7 439 - -
Vra2g1599 613 Gene3D - 150 316 IPR015915 GO:0005515
Vra2g1599 613 PANTHER GALACTOSE OXIDASE/KELCH REPEAT SUPERFAMILY PROTEIN 7 439 - -
Vra2g1599 613 Pfam Kelch motif 69 107 IPR006652 GO:0005515
Vra2g1599 613 MobiDBLite consensus disorder prediction 530 549 - -
Vra2g1599 613 Pfam Kelch motif 117 160 - -
Vra2g1599 613 SUPERFAMILY Kelch motif 3 163 IPR015915 GO:0005515
Vra2g1599 613 Gene3D - 1 149 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1599 Vra-Chr2 23987924 23994228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1599 107 320 Acyl Lipid Metabolism Gene Families AT3G05420 30.131 3.27e-27 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1599 - - gmx:100785267 969.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1953 7 38997362 39004204 Vra2g1599 2 23987924 23994228 PCT