Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1555 ATGGAAAACTCTGACGAAAGAAACGAATCACTTCCTTTCTCTCCAAACCCTAACAATGCCGACGACGACGAAATCGACGAACAAGAAGACGAAGAGGAAGAGGAAGAAGACGACGGCCACGACGACGTCGTTTCACACGAGCCGTACAATCGGAACGACCGATCCTCATTGTCGAGTTTACACGAGCAGCGTTTAAAGCTGGAAGCCCTCTCCCGGCGATTGGCTTCGGAGCTGGTCCCTATCCGCGTCCACGATGTGCTGATTCGAGGCAACACCAAAACCAAGGATTGGGTGATCGAGGCGGAGCTCAAGCTTCTCCAGGACGCTGCCACCGTGCAGGAGCTCATTCGCGCCTCCGAAATCGCCCTCGCCAGGCTCCGCAGCCTCGAGATTTTCGAGTCCACCGAGCTCACGCTCCAGGCTGGGCCGCCGGAGCTGCCTCACACCGCCAATGTCATCGTCGACGTTGTCGAGACCGCGAACAAAGTTTCCGGCGAATTTGGCGTTTACACCAAACCCTCGACAAGTTCGTGGACTGCTGAAGGTGGTCTTAAGTACAAAAACTTGTTAGGTTATGGTGATCTATGGGATGCCTCTTTGGCCTATGGTGGCAACCAAGCAACAGAGGTGAGTGTAGGAGTGTTTGCTCCAAGACTGAAAGGGTTGTTAACTCCTCTTGTAGCACGACTTTCCATGCTTTCCCAAGATTGGCAAGAGTTTTCTTCATACAAAGAGCAGCTGTTAGGATTGTCTCTTGGCTTAATCTCAACCAGGCACCATGACTTAGTCTACACTCTTGGATGGCGTACCTTGACTGATCCATCTCAAATGTCATCCAGGTCTATAAGGAGGCAGCTTGGCCATGGTTTATTATCATCTTTGAAGTATACATTTAAAATTGACAGGAGAAACTCGGCAATTAGGCCTACAAGTGGATATGCTTTTCTTTCCACCACTCACTTTGGTGGCCTTACACCAGATCATCGGAGCTTGCGATTCCTGCGCCAGGAATTCGATGTTCGCTGTGCCATCCCCCTTCCGTTTTATAACACAGCTCTTAACCTTGGGATTTCAGCTGGTGCCGTTTTTCCATGGGGGCATGACTTCATGAACAAGCCATCTCCTCTTCCTGAAAGGTTTTATTTGGGAGGTGATTTCTCTCCAGTTTGCACTCTGGGAGGGCCAATAACATTGTGGGGATTTAAAACTAGGGGACTAGGTCCTACTGAACCACGAAGGAGAATTAGAAACGAAATTGTTGATGACAATGATGATTCCTCTAAACGGGACTTCATTGGAGGAGATGTTGCTGTTACGGCATTTGCAGACCTGTCTTTTGATCTCCCAATTAGGTGGTTGAGAAATCATGGAATCCATGGTCATCTTTTTGCTGGTGCTGGGAATACGGCAAAATTGACTCAGAATGAATATAGGCGCTTTTCACCTCGGAGGTTCTTAGAATCATTCCGAACATCTGTTGGATGTGGTTTTGTTGTTCCTACTAAACTTTTTCGCCTAGAGGGTAACTTCTACCACGTGCTCAAGCAGGATGAATATGACCGTGGGAAGACAGGATTTAGGTTCAGCTTCTCAGCTCCTTCTTAG 1605 0.486 MENSDERNESLPFSPNPNNADDDEIDEQEDEEEEEEDDGHDDVVSHEPYNRNDRSSLSSLHEQRLKLEALSRRLASELVPIRVHDVLIRGNTKTKDWVIEAELKLLQDAATVQELIRASEIALARLRSLEIFESTELTLQAGPPELPHTANVIVDVVETANKVSGEFGVYTKPSTSSWTAEGGLKYKNLLGYGDLWDASLAYGGNQATEVSVGVFAPRLKGLLTPLVARLSMLSQDWQEFSSYKEQLLGLSLGLISTRHHDLVYTLGWRTLTDPSQMSSRSIRRQLGHGLLSSLKYTFKIDRRNSAIRPTSGYAFLSTTHFGGLTPDHRSLRFLRQEFDVRCAIPLPFYNTALNLGISAGAVFPWGHDFMNKPSPLPERFYLGGDFSPVCTLGGPITLWGFKTRGLGPTEPRRRIRNEIVDDNDDSSKRDFIGGDVAVTAFADLSFDLPIRWLRNHGIHGHLFAGAGNTAKLTQNEYRRFSPRRFLESFRTSVGCGFVVPTKLFRLEGNFYHVLKQDEYDRGKTGFRFSFSAPS* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1555 534 PANTHER SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER 19 532 IPR039910 -
Vra2g1555 534 PANTHER OUTER MEMBRANE OMP85 FAMILY PROTEIN 19 532 - -
Vra2g1555 534 MobiDBLite consensus disorder prediction 20 41 - -
Vra2g1555 534 Pfam Omp85 superfamily domain 188 531 IPR000184 GO:0019867
Vra2g1555 534 MobiDBLite consensus disorder prediction 1 58 - -
Vra2g1555 534 Gene3D membrane protein fhac: a member of the omp85/tpsb transporter family 170 532 - -
Vra2g1555 534 Gene3D membrane protein fhac 80 159 - -
Vra2g1555 534 Coils Coil 18 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1555 Vra-Chr2 23440993 23445727 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1555 K07277 - gmx:100785408 905.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g1555 2 23440993 23445727 Vra6g0570 6 4992758 4997517 PCT