Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1508 ATGGGAGTTGGAGATTACTTGTCTGATCTAATGGGAACAGGTAGTGGAAGCCGCCAACACAGCAGCAATAGCAGAAAGCAATTGCAGACCGTAGAGCTGAGGGTGACGATGGATTGTGATGGCTGTGTGCTCAAGGTTAAAAAAACTCTCTCTTCGTTAGATGGAGTAGAATCAGTGGAGATAAACAGGAAACAGCAGAAAGTGACGGTAACTGGTTACGTGGAAGCAAACAAGGTGCTAAAGAAGGCGAAGTCAACGGGGAAGAAGGCTGAGATATGGCCTTACGTGCCTTACAGCATGGTGGCAAATCCTTATACTGTTCAAGCTTATGACAAGAAGGCTCCTCCGGGTTACGTGAGAAGAGTGGACAACTCTGCCACCATTGGAACAGTGACAACTTATGGAGATCCATACACCACCATGTTCAGTGATGAAAACCCGAATGCATGTTCCATCATGTAG 462 0.4654 MGVGDYLSDLMGTGSGSRQHSSNSRKQLQTVELRVTMDCDGCVLKVKKTLSSLDGVESVEINRKQQKVTVTGYVEANKVLKKAKSTGKKAEIWPYVPYSMVANPYTVQAYDKKAPPGYVRRVDNSATIGTVTTYGDPYTTMFSDENPNACSIM* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1508 153 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 4 153 IPR045181 GO:0046872
Vra2g1508 153 SUPERFAMILY HMA, heavy metal-associated domain 26 95 IPR036163 GO:0046872
Vra2g1508 153 Gene3D - 16 94 - -
Vra2g1508 153 CDD HMA 32 91 IPR006121 GO:0046872
Vra2g1508 153 ProSiteProfiles Heavy-metal-associated domain profile. 37 92 IPR006121 GO:0046872
Vra2g1508 153 Pfam Heavy-metal-associated domain 33 89 IPR006121 GO:0046872
Vra2g1508 153 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 20 4 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1508 Vra-Chr2 23053991 23055010 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1508 - - gmx:100780586 267.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g1327 1 20684744 20685770 Vra2g1508 2 23053991 23055010 PCT