Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1327 ATGGGAGTTGGAGGCACACTGGAATACTTGTCTGATCTAATGGGTAGTGGGTATCAGCAGAGGAAGAAAAAGAAGAAGCAGTTTCAGACGGTGGAGTTGAAGGTGAGGATGGATTGTGATGGATGTGAGCTTAAGGTGAAGAACGCCCTCTCTTCGCTGAGCGGAGTGAAATCTGTGGAGATAAACCGTAAACAGCAGAAAGTGACAGTAAGTGGGTATGTTGAAGCAAACAAGGTGTTGAAGAAGGCGAAGTCAACAGGGAAAAAGGCTGAGATTTGGCCGTATGTGCCATACAATTTGGTGGCACATCCATATGCAGTTGCAGCTTATGATAAGAAGGCTCCTCCTGGTTATGTGAGGAGAGTGGAGATTGCTGCTAACACTGGAACAATCACAAGATATGAAGACCCTTACGTCACCATGTTCAGTGATGAAAACCCAAATGCCTGCTCTATCATGTAG 462 0.4567 MGVGGTLEYLSDLMGSGYQQRKKKKKQFQTVELKVRMDCDGCELKVKNALSSLSGVKSVEINRKQQKVTVSGYVEANKVLKKAKSTGKKAEIWPYVPYNLVAHPYAVAAYDKKAPPGYVRRVEIAANTGTITRYEDPYVTMFSDENPNACSIM* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1327 153 ProSiteProfiles Heavy-metal-associated domain profile. 37 92 IPR006121 GO:0046872
Vra1g1327 153 CDD HMA 32 91 IPR006121 GO:0046872
Vra1g1327 153 Pfam Heavy-metal-associated domain 34 89 IPR006121 GO:0046872
Vra1g1327 153 Gene3D - 16 94 - -
Vra1g1327 153 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 3 153 IPR045181 GO:0046872
Vra1g1327 153 SUPERFAMILY HMA, heavy metal-associated domain 28 94 IPR036163 GO:0046872
Vra1g1327 153 PANTHER - 3 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1327 Vra-Chr1 20684744 20685770 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1327 - - gmx:100500473 281.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g1327 1 20684744 20685770 Vra2g1508 2 23053991 23055010 PCT