Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1501 ATGTTCATTGAGAATTTTAAGGTTGAGAGTCCTAATGTGAGGTACACCGAGACCGAGATTCNGTCAGTCTATAATTATGAAACCACCGAGCTTGTTCATGAGAACAGGAATGGCACCTATCAATGGATTGTCAAACCCAAATCTGTTAAATATGAATTTAAAACCGACACCCATGTCCCTAAATTGGGAGTAATGCTTGTGGGGTGGGGTGGAAACAACGGTTCAACCCTCACCGGTGGTGTTATTGCCAACCGAGAGGGCATTTCATGGGCAACGAAGGACAAAATCCAACAAGCCAATTACTGTGGTTCCCTCACCCAAGCTTCCACTATCCGAGTTGGGTCCTTCCAAGGAGAGGAGATCTATGCTCCATTCAAGAGCCTCCTTCCAATGGTTAACCCTGACGACATTGTGTTTGGGGGATGGGATATCAGTAACATGAACCTGGCTGATGCCATGGGTAGGGCCAAAGTGTTTGACATCGATTTGCAGAAGCAGTTGAGGCCTTATATGGAATCCATGGTTCCACTCCCTGGAATCTATGACCCAGATTTCATTGCTGCCAACCAAGAAGAACGTGCCAACAATGTGATCAAGGGCACAAAGAAAGAACAAGTTTTACAAATCATCAAAGACATTAAGGAGTTTAAAGCAGCCACCAAAGTGGACAGGGTGGTTGTCCTGTGGACTGCCAACACAGAGAGGTACAGCAATTTGGTCGAGGGTCTTAATGACACCACGGAGAACCTCCTGGCTGCCTTGGACAGAAATGAGGCTGAGATTTCTCCTTCCACCCTGTATGCCATAGCTTGTGTCATGGAAAATGTTCCATTCATCAACGGAAGCCCTCAGAACACTTTTGTCCCTGGGCTGATTGATTTTGCCATCGAGAAAAACAGTTTGATTGGAGGAGATGACTTTAAGAGTGGTCAGACCAAAATGAAATCCGTGCTGGTAGATTTCCTGGTGGGGGCTGGTATCAAGCCAACATCAATAGTTAGTTACAACCATCTGGGAAATAATGATGGTATGAATCTCTCTGCTCCACAAACCTTCCGTTCCAAGGAAATCTCCAAGAGCAATGTTGTTGATGATATGGTGAACAGCAATGCTATCCTCTTTGAGCCCGGTGAACATCCTGACCATGTTGTTGTTATTAAGTATGTGCCTTATGTTGGGGACAGCAAGAGAGCCATGGATGAGTACACTTCAGAGATATTCATGGGTGGAAAGAACACCATTGTTTTGCACAATACATGCGAAGATTCTCTCTTAGCTGCTCCTATTATCTTGGACTTGGTCCTTCTTGCTGAGCTTAGCACTCGTATCCAGTTCAAAGCTGAAAATGAGGGAAAATTCCACTTGTTCCACCCAGTTGCTACCATTCTCAGTTACCTGACCAAGGCTCCTCTGGTTCCACCGGGTACACCAGTGGTGAATGCATTGTCAAAGCAGCGTGCAATGCTGGAAAACATTCTGAGAGCTTGTGTTGGACTTGCCCCAGAGAATAACATGATTCTCGAGTACAAGTGA 1533 0.4547 MFIENFKVESPNVRYTETEIXSVYNYETTELVHENRNGTYQWIVKPKSVKYEFKTDTHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDKIQQANYCGSLTQASTIRVGSFQGEEIYAPFKSLLPMVNPDDIVFGGWDISNMNLADAMGRAKVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQEERANNVIKGTKKEQVLQIIKDIKEFKAATKVDRVVVLWTANTERYSNLVEGLNDTTENLLAALDRNEAEISPSTLYAIACVMENVPFINGSPQNTFVPGLIDFAIEKNSLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVNSNAILFEPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIILDLVLLAELSTRIQFKAENEGKFHLFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1501 510 Coils Coil 240 260 - -
Vra2g1501 510 PANTHER INOSITOL-3-PHOSPHATE SYNTHASE 1 510 - -
Vra2g1501 510 Pfam Myo-inositol-1-phosphate synthase 310 423 IPR013021 -
Vra2g1501 510 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 510 IPR036291 -
Vra2g1501 510 Pfam Myo-inositol-1-phosphate synthase 62 494 IPR002587 GO:0004512|GO:0006021|GO:0008654
Vra2g1501 510 PIRSF Myoinositol-ppht_synth 50 510 IPR002587 GO:0004512|GO:0006021|GO:0008654
Vra2g1501 510 PANTHER MYO-INOSITOL-1 PHOSPHATE SYNTHASE 1 510 IPR002587 GO:0004512|GO:0006021|GO:0008654
Vra2g1501 510 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 309 422 - -
Vra2g1501 510 Gene3D - 1 355 - -
Vra2g1501 510 Gene3D - 382 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1501 Vra-Chr2 22990251 22993074 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1501 K01858 - gmx:106797152 976.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g1319 1 20625612 20629281 Vra2g1501 2 22990251 22993074 PCT