Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1319 ATGTTCATCCAGAGTTTTAAGGTGGAGAGTCCCAACGTGAAGTACACAGAGAGTGAGATTGAGTCTGTGTACAATTACGAAACCACTGAGCTTGTTCACGAGAACAAGAATGGCAGTTATCAGTGGGTTGTGAAGCCCAAAACTGTGAAATATGAATTTAAAACAAACACTGATGTGCCTAAATTAGGGGTAATGCTTGTTGGTTGGGGTGGAAACAATGGCTCAACGCTCACCGGTGGTGTTATTGCTAACAGAGAGGGTATTTCATGGGCAACAAAAGACAAGATTCAACAGGCCAATTACTTTGGGTCACTGACCCAGGCATCAGCTATCAGAGTAGGGTCTTTCCAAGGAGAGGAAATATATGCTCCTTTCAAGAGTCTGCTTCCAATGGTAAACCCTGATGATATTGTGTTCGGGGGATGGGATATCAGCAACTTGAACCTGGCTGATGCCATGGCCAGGGCCAAGGTGTTTGACATCGACCTGCAGAAACAGTTGAGGCCTTACATGGAATCCATGACTCCACTCCCTGGAATCTTTGACCCCGATTTCATTGCTGCCAACCAAGGAGACCGTGCCAACAACGTCATCAAGGGCACAAAGAAAGAACAAGTTCAACAAATCATCAAAGACATTAAGGAGTTTAAGGAAAAGAGCAAGGTTGACAAGGTGGTTGTGCTCTGGACAGCCAACACAGAGAGGTACAGCAACGTAGTTGTGGGATTAAACGACACCGAGGAAAACCTCTTGGCTTCCTTGGACAGGAACGAGGCTGAGATTTCCCCTTCCACCTTGTATGCCATTGCTTGTGTCATGGAAAATGTTCCCTTCATAAATGGAAGCCCTCAAAACACCTTTGTCCCAGGGTTGATTGATCTGGCCATCAGGAGGAACAGTTTGATTGGAGGAGATGACTTTAAGAGTGGTCAGACCAAAATGAAATCTGTGTTGGTGGATTTCCTTGTGGGGGCAGGCATCAAGCCAACATCAATAGTGAGTTACAACCATCTGGGAAACAATGATGGTATGAATCTTTCAGCCCCTCAAACCTTCCGCTCTAAGGAAATTTCCAAGAGCAATGTTGTTGACGACATGGTCAACAGCAACGCCATCCTCTATGAACCTGGCGAACATCCTGACCATGTTGTTGTTATTAAGTATGTGCCTTACGTTGCGGATAGCAAGAGGGCGATGGATGAGTACACTTCAGAGATATTCATGGGTGGAAAGAACACAATAGTGTTACACAACACCTGTGAGGATTCACTATTAGCTGCTCCTATTATCTTGGACCTGGTTCTTCTTGCTGAGCTTAGCACTCGAATCCAGTTTAAAGCTGAAAATGAGGGCAAGTTTCACTCATTCCACCCGGTTGCCACCATCCTCAGTTACTTGACCAAGGCCCCTCTTGTTCCACCTGGTACTCCAGTGGTGAATGCATTATCGAAGCAGAGAGCTATGCTGGAAAATATCATGAGGGCTTGTGTTGGATTAGCTCCCGAGAACAACATGATCCTGGAGTACAAGTGA 1533 0.4573 MFIQSFKVESPNVKYTESEIESVYNYETTELVHENKNGSYQWVVKPKTVKYEFKTNTDVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDKIQQANYFGSLTQASAIRVGSFQGEEIYAPFKSLLPMVNPDDIVFGGWDISNLNLADAMARAKVFDIDLQKQLRPYMESMTPLPGIFDPDFIAANQGDRANNVIKGTKKEQVQQIIKDIKEFKEKSKVDKVVVLWTANTERYSNVVVGLNDTEENLLASLDRNEAEISPSTLYAIACVMENVPFINGSPQNTFVPGLIDLAIRRNSLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVNSNAILYEPGEHPDHVVVIKYVPYVADSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIILDLVLLAELSTRIQFKAENEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENIMRACVGLAPENNMILEYK* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1319 510 PANTHER INOSITOL-3-PHOSPHATE SYNTHASE 1 510 - -
Vra1g1319 510 Pfam Myo-inositol-1-phosphate synthase 310 423 IPR013021 -
Vra1g1319 510 Pfam Myo-inositol-1-phosphate synthase 62 494 IPR002587 GO:0004512|GO:0006021|GO:0008654
Vra1g1319 510 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 510 IPR036291 -
Vra1g1319 510 PIRSF Myoinositol-ppht_synth 50 510 IPR002587 GO:0004512|GO:0006021|GO:0008654
Vra1g1319 510 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 309 422 - -
Vra1g1319 510 PANTHER MYO-INOSITOL-1 PHOSPHATE SYNTHASE 1 510 IPR002587 GO:0004512|GO:0006021|GO:0008654
Vra1g1319 510 Gene3D - 381 510 - -
Vra1g1319 510 Gene3D - 1 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1319 Vra-Chr1 20625612 20629281 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1319 K01858 - gmx:100800820 991.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g1319 1 20625612 20629281 Vra2g1501 2 22990251 22993074 PCT