Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1002 ATGAAACATAGGAGTTGCAGGGAGTTAAGAAGCAACGTCAATGGCTTCGAAGAAGACGATGAAATGAAGAAACTTGATTCTGATACTGCTCCTAAAAGACTCACCTTGAACGAAAATAAAGCACCCATCAAAGAAACTTTGGTTATTCTAAGAATTGAATTGACTGAGAATCAGATACCACATTCTCTGGCAAGAAGATGGATTTCGAGAGAAGAGGGTACGAAGGTTTTTTCTAAATACATGGGAACAAAAGGGGGAGATTCTCACGACTCATGGGTGTCGAAGACGCACAAAGCGGTGAAGAAAGCTAACAATTCTGTCATTGGGTACGTGAGTTCCAAATCTCACTGGGCATTGTCTCATGGCCACATTAGCCTGAGGCCACCTCAACCCAAAAGTGTGGAGAAGATTGTGAGCAAGGGCATTGATCTCTTCAGACACAAGAAACCTTTAAATATTGAGTTGGTTCATCAACTACGTTTGCTTGATAATCGTTTCATCCAATGGCGGTTTGCAAATGCAAGAGCTTGTGCTGTGAATCACACCATTTTCCTTCAAGTTTGGGGCAATTTCATATGTGCTTTGAATACTCAAGCCAAACTGCGATATTCAATGGTACTAACGAGGATAGAAATTGAGAGAGAGAAGCTTGAGATGAAACTAGATGGTATACTGCAATCTCAAATGAAGCTATTGAAAACATGGGGAAGTATGAAAAAGCAATACGCAGCTGCAATCACCTTATTGCAAGAATGTTTGTATTCTGTTGCATGCAGAGTTCATCTTCTGGAAGGTGCTAAGATGGATTTGAAATTAGCATCAGTTTCTCAGAAGCGTGCAGTGAAGCTAACAAATTCCATGAACTCATCCTTATCTGCATTTTTACCTTTGGCTGACGAGATTGCTGGATTGCTATCAGAATTAGCAGAAGTTGTTGTACAGGAGAAGTTTCTCTTACAGGAATTCAATGATATGTTCCATACCATGTGTCTCCTTCAGCTTGAAGAAAGCAACCTGAGGTGCAGTCTTATTCAACTTAATTCTTGA 1047 0.4031 MKHRSCRELRSNVNGFEEDDEMKKLDSDTAPKRLTLNENKAPIKETLVILRIELTENQIPHSLARRWISREEGTKVFSKYMGTKGGDSHDSWVSKTHKAVKKANNSVIGYVSSKSHWALSHGHISLRPPQPKSVEKIVSKGIDLFRHKKPLNIELVHQLRLLDNRFIQWRFANARACAVNHTIFLQVWGNFICALNTQAKLRYSMVLTRIEIEREKLEMKLDGILQSQMKLLKTWGSMKKQYAAAITLLQECLYSVACRVHLLEGAKMDLKLASVSQKRAVKLTNSMNSSLSAFLPLADEIAGLLSELAEVVVQEKFLLQEFNDMFHTMCLLQLEESNLRCSLIQLNS* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1002 348 Pfam QWRF family 92 320 IPR007573 -
Vra2g1002 348 Coils Coil 207 227 - -
Vra2g1002 348 PANTHER AUGMIN FAMILY MEMBER 46 348 - -
Vra2g1002 348 PANTHER QWRF MOTIF PROTEIN (DUF566)-RELATED 46 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1002 Vra-Chr2 10507076 10508696 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1002 - - vra:106780229 690.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g1001 2 10500656 10503596 Vra2g1002 2 10507076 10508696 PCT