Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1001 ATGAAGAGCGATTCCAATGGCTCTGTCTCTCCTTATTCTCCCAAACCCAGAACCCGTATCGTCAATTCTCGGTTCATGTCTCCAAACTCGACCGCTTCGCCTGAACCTGGTTCAGGCTCCCCGCTCGGCCGGTTCAACCGATTGGCGAGGAAAGACTCTACCACTCTCGCGGATCACATTGACAACGAGAGGCTCAAAGAAAGAGAAGAACGCCACCAGCAGAATAAGAAATCCGCAAACAAAACAGTCTCTGTTTTTTCTGCTCTCACGAAACAGAGAAGCTGCAGGGAGTTCAGAAACAACAGCAATTGCTTAGAAGAAAACGATCAAGATCGAGACGTGGTTGGTAGGACAACAGCAATTTCTCCATCTCTTTCTCCCCTGGTGAAGAAACCAAGTTCTTATTTTGATCCAGCGAGACACTCTCTAGATGAGAACACCTTTAAAAGGAGCTTTCTTTGTGCTAAGAACTCAATTGATTCGGAATCGGAAAATATGAGTTTGAATTCTGTTCCTCTGGAAAGAACACCGAGTTCAAGGAAATTGGGTAGGGAGGTTTCTTCTAAGTACATGACAGCGTGTGGCAGAAGAGGAGAAGCTTCTGATTCAGACCCTTTGTCTTTTGATGATTCATGGATGATGAAGAAGAATATGACCGAGAAAGCGGTGAAGAAGGCTAACTCGTTTATCGGGTACATGAGTTCCAAATCTCAGTGGGCATTGTCTCCAGGGAGATCAGGATCACCACCTTTGTCTTTCGAAAGCAAGGATAATAAGGATAAGCCATTGTCGTTTTCGAACTTGAAGCCTCCACACAAGCGAGTGGAGAAGATTCTGAGCATGGGTTTTGATCTCTTCAGGACTAAGAAATCGCATTCTACGAGTGAGGTGGTTCATCAGTTTCGTCTGCTTTATAACCGGTTGATTCAATGGCGGTTCGCAAATGCTAGAGCTTACACTGTGAATCACTCCATGTCTCTTCAGGCTCAGAGCAATTTGATAAATGTTTGGGATGGTTTGACGAAGTTGCGACATTCGGTGATGCAAAAGAAGATACAGGTTGAGAGAGAAAAACTCAAGATGAAGCTAAATTTTGTATTGCATTCTCAGATGAAGTTGTTGGAAACATGGGGATGCATGGAGAGACAACATTTAGCAGCAATTACCACAATGAGAGAGTGTTTGCATTATGTTATCTGCAAAGTTCCTCTATTGGATGGGGCAAAGGTGGATATATCATTAGTATCTATTGGTGAGCGTTATGCATCTGATCTAACAGATTCCATCGTGGCAGTGTTATCTAATTTTTTACCTTTGGCTTATAAAACATCTGAGTTGATATCAAAGTTAGCCAGAATTGTCGCGGAAGAGAAGTTGCTCTTACAAGAATTTAATGATGTCTTCCATGACATATGTGTTCTTGAGCTTAAAGAAAGGAGCCTAGTCTGCAGTCTCATTCAACTTGAATGTTGA 1473 0.4291 MKSDSNGSVSPYSPKPRTRIVNSRFMSPNSTASPEPGSGSPLGRFNRLARKDSTTLADHIDNERLKEREERHQQNKKSANKTVSVFSALTKQRSCREFRNNSNCLEENDQDRDVVGRTTAISPSLSPLVKKPSSYFDPARHSLDENTFKRSFLCAKNSIDSESENMSLNSVPLERTPSSRKLGREVSSKYMTACGRRGEASDSDPLSFDDSWMMKKNMTEKAVKKANSFIGYMSSKSQWALSPGRSGSPPLSFESKDNKDKPLSFSNLKPPHKRVEKILSMGFDLFRTKKSHSTSEVVHQFRLLYNRLIQWRFANARAYTVNHSMSLQAQSNLINVWDGLTKLRHSVMQKKIQVEREKLKMKLNFVLHSQMKLLETWGCMERQHLAAITTMRECLHYVICKVPLLDGAKVDISLVSIGERYASDLTDSIVAVLSNFLPLAYKTSELISKLARIVAEEKLLLQEFNDVFHDICVLELKERSLVCSLIQLEC* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1001 490 MobiDBLite consensus disorder prediction 238 267 - -
Vra2g1001 490 Pfam QWRF family 179 462 IPR007573 -
Vra2g1001 490 PANTHER QWRF MOTIF PROTEIN (DUF566)-RELATED 15 489 - -
Vra2g1001 490 PANTHER AUGMIN FAMILY MEMBER 15 489 - -
Vra2g1001 490 MobiDBLite consensus disorder prediction 1 85 - -
Vra2g1001 490 MobiDBLite consensus disorder prediction 1 37 - -
Vra2g1001 490 Coils Coil 62 82 - -
Vra2g1001 490 MobiDBLite consensus disorder prediction 238 253 - -
Vra2g1001 490 MobiDBLite consensus disorder prediction 51 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1001 Vra-Chr2 10500656 10503596 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1001 - - var:108339347 764.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g1001 2 10500656 10503596 Vra2g1001 2 10500656 10503596 ECH
Vra2g1001 2 10500656 10503596 Vra2g1002 2 10507076 10508696 PCT