Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0828 ATGGCAACACCAAAGCAGTCATACGAGCAAAACCAACAACAAACAAATGTGCAGCGTGTGAGAAATTCAGGGATGATTAACGTCAACCAGAGTCCAATGAGGGATGACAAGGAAGAGGAGATGTCAAGATCAGCTTTGGCAATGTTCAGAGCAAAGGAAGAAGAAATTGAGAGGAAGAAAATGGAGGTGAGGGATAAGGTTCACGCTTATCTGGGTCGAGTAGAGGAGGAAACAAAACGCTTGGCTGAGATTAGAGAAGAGCTTGAGGGTCTGACAGATCCATTGAGGAAGGAAGTTGCAATGGTTAGAAAGAAGATAGACAGTGTGAACAAAGAGCTAAAGCCACTGGGCCAAACCTGCCAGAGAAAGGAAAAAGAATATAAGGAAGCCCTTGATGCTTTCAATGAGAAAAACAAGGAAAAAGCTCAACTTGTTACCAAACTAATGGAGCTGGTGACTGAAAGTGAGAAGTTGAGGATGAAGAAGTTGGAGGAGTTAAGCAAAAACGTAGATACCCTAAATTGA 525 0.4267 MATPKQSYEQNQQQTNVQRVRNSGMINVNQSPMRDDKEEEMSRSALAMFRAKEEEIERKKMEVRDKVHAYLGRVEEETKRLAEIREELEGLTDPLRKEVAMVRKKIDSVNKELKPLGQTCQRKEKEYKEALDAFNEKNKEKAQLVTKLMELVTESEKLRMKKLEELSKNVDTLN* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0828 174 Coils Coil 67 87 - -
Vra2g0828 174 MobiDBLite consensus disorder prediction 1 30 - -
Vra2g0828 174 PANTHER - 8 173 - -
Vra2g0828 174 PANTHER RAB6-INTERACTING PROTEIN GORAB 8 173 IPR007033 -
Vra2g0828 174 Coils Coil 120 140 - -
Vra2g0828 174 MobiDBLite consensus disorder prediction 1 43 - -
Vra2g0828 174 Pfam Transcriptional activator 21 172 IPR007033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0828 Vra-Chr2 7596766 7601428 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0828 - - gmx:100499699 302.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0828 2 7596766 7601428 Vra2g0828 2 7596766 7601428 ECH
Vra3g0520 3 5850280 5852361 Vra2g0828 2 7596766 7601428 ECH