Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0825 ATGTGGCTCCTAGGAGCTATACTTTTGGTTCATAAGACTTGTGTTACAGCTATGGGATCTTTTAATCACTATGTGATTGTTAAGTTCAAGGATGGTGTGGAAGTTGAAGAGCTCATTCAAGGGTTGGAGAAGATGGTATCAGGAATTGATCAAGTCAAATCCTTTGAATGGGGAAAGGACATAGAAAGCCATGAAATGCTAAGACAAGGTTTCACTCATGTTTTCTTGATGGCATTCAATGGAAAAGAGGAGTTCAATGCATTTCAGACTCATCCAAATCATGTTGAGTTCTCAGGAGTGTTTTCACCAGCTATTGAGAAGATTGTGGTGCTGGATTTTCCATCTAAGCTTGTCAAAGCACCAGCATGA 369 0.3984 MWLLGAILLVHKTCVTAMGSFNHYVIVKFKDGVEVEELIQGLEKMVSGIDQVKSFEWGKDIESHEMLRQGFTHVFLMAFNGKEEFNAFQTHPNHVEFSGVFSPAIEKIVVLDFPSKLVKAPA* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0825 122 SMART Dabb_2 21 115 IPR013097 -
Vra2g0825 122 Gene3D - 17 122 - -
Vra2g0825 122 ProSiteProfiles Stress-response A/B barrel domain profile. 21 113 IPR013097 -
Vra2g0825 122 PANTHER - 18 121 IPR044662 -
Vra2g0825 122 SUPERFAMILY Dimeric alpha+beta barrel 18 114 IPR011008 -
Vra2g0825 122 PANTHER EXPRESSED PROTEIN 18 121 - -
Vra2g0825 122 Pfam Stress responsive A/B Barrel Domain 22 114 IPR013097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0825 Vra-Chr2 7555813 7556741 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0825 - - vra:106755810 249.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0825 2 7555813 7556741 Vra2g0825 2 7555813 7556741 ECH
Vra4g0404 4 6967712 6968498 Vra2g0825 2 7555813 7556741 PCT