Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0806 ATGAATCGAAGCAGCACAATGGCGCGAGTGGATCTGGACGGTAACCCCATCAAGCCTATCACGATCTGCATGATCGGTGCCGGTGGGTTCATCGGCTCGCACCTCTGCGAGAAACTCATGCACGAAACCCCTCACACGGTTTTCGCCTTGGACGTTTACAATGACAAGATCAAGCACCTTCTGGAACCCGATTCTCTGCCTTGGGCCGGTCGCATCACCTTCCACCGCCTCAACATCAAACACGATTCTCGCCTCGAAGGTCTCATCAAGATGGCAGATCTCACAATTAATCTGGCTGCGATTTGCACCCCTGCGGATTACAACACGCGTCCGCTCGACACCATTTACAGCAATTTCATTGACGCACTCCCCGTGGTGAAATACTGTTCAGAGAATAACAAGCGCCTTATCCACTTCTCCACTTGCGAAGTGTACGGGAAAACGATTGGAGCCTTTCTCCCCAAAGATAGTCCTCTTCGTAAGGATCCGGCGTACTTTGTCCTTAAAGAAGACGAATCTCCTTGCATTTTTGGTTCTATTGAAAAGCAGAGGTGGTCTTACGCCTGTGCTAAACAGTTGATTGAGAGGCTGATTTATGCTGAGGGCGCTGAAAATGGTTTGGAATTCACCATTGTTAGGCCTTTTAACTGGATTGGACCTAGAATGGATTTCATTCCTGGCATCGATGGTCCAAGTGAGGGTGTTCCTCGGGTTCTTGCATGCTTTAGCAATAATCTTCTCAGAGGAGAGCCCCTCAAGCTTGTAGACGGTGGACAGTCTCAAAGGACCTTTGTTTACATTAAAGATGCTATTGAGGCTGTCTTGTTGATGATTGAAAATCCTGCCAGAGCTAATGGTCATATATTTAATGTCGGTAACCCAAACAACGAGGTTACTGTTAGGCAGCTTGCTGAAATAATGATTCAGGTTTACTCAAAGGTGAGTGGAGAAAAAACTCCTGAAACCCCAACCATTGATGTGAGCTCAAAAGAATTTTATGGTGAGGGATATGATGACAGTGACAAGAGAATTCCTGACATGACCATAATAAACAAGCAGCTTGGTTGGAATCCTAAGACTTCGCTCTTCGACCTGCTGGAATCCACTCTGACCTATCAGCACAGGACATATGCTGAAGCCATCAAGAAAGTAATTGCAAAACCCGTTGCAAGTTAA 1176 0.4651 MNRSSTMARVDLDGNPIKPITICMIGAGGFIGSHLCEKLMHETPHTVFALDVYNDKIKHLLEPDSLPWAGRITFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGAFLPKDSPLRKDPAYFVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRGEPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEIMIQVYSKVSGEKTPETPTIDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLFDLLESTLTYQHRTYAEAIKKVIAKPVAS* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0806 391 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 21 374 IPR036291 -
Vra2g0806 391 Pfam NAD dependent epimerase/dehydratase family 22 292 IPR001509 -
Vra2g0806 391 Gene3D - 20 382 - -
Vra2g0806 391 CDD Arna_like_SDR_e 21 376 IPR045869 GO:0016831
Vra2g0806 391 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 7 390 - -
Vra2g0806 391 PANTHER - 7 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0806 Vra-Chr2 7241271 7244068 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0806 K12449 - gmx:102667779 763.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0806 2 7241271 7244068 Vra2g0806 2 7241271 7244068 ECH
Vra4g0381 4 6709535 6712239 Vra2g0806 2 7241271 7244068 PCT