Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0803 ATGGAGTATTCAAGGTCCTTCTTGGCTTCTTTTCTTCTTGCTTTGTTGCTGAATTTGAGCAATGGACAGCCTCTGGTACCTGCATTGTTCATATTTGGGGACTCTGTTGTTGATGTGGGCAATAATAATCACAAATTTACTGTTATGAAAGCAAACTTTCCTCCTTATGGAAGAGACTTTGAGAATCACTATCCAACAGGAAGGTTCTGCAATGGAAAGCTTGCCACAGACTTCACAGCTGAAGTACTTGGATTTACCTCTTATCCCCCAGCTTACCTTAACTTGAACAACAAAGGAAATAACCTCTTGAATGGTGCTAACTTTGCCTCAGCTGCTTCTGGTTACTATGAACCCACAGCCAAACTATATAATGCAATTCCATTGCGCCAGCAGCTGGAATACTACAAGGAGTGCCAGAACAAATTGGTGGAAGCAGCAGGACAATCAAGTGCTTCATCAATTATATCTGATGCTATATATCTTGTCAGTGCTGGAACAAGTGATTTCATTCAGAACTACTACATAAATCCTTTGCTTAACAAGTTTTATACAATTGATCAATTCTCAGACACCCTCTTGAGGTTCTATTCAGACTTCATCCAGAGTTTACATGCACTGGGAGCAAGGAGGATCGGTGTGACATCATTGCCTCCAATAGGTTGCTTACCTGGAGCCATCACTCTCTTTGGTTTTAATAGCAACGAATGTGTGGCCAGTTTAAACAGTGATGCAATTACCTTCAATGTAAAGCTAAACACCACATCACATAACTTGCAAAACATGCTTCCAGGCCTCAATTTGGTTGTCTTTGATATCTACCAACCTCTCTATGATTTGGTCACCAAGCCTTCTGAAAATGGATTTTTTGAAGCAAGGAAGGCTTGTTGTGGAACAGGGTTGATAGAGACATCTATATTGTGCAATAGGAAGTCCATAGGAACATGCACCAATTCATCTGAGTATGTATTCTGGGATAGTTTCCATCCCTCAGAGGCTGCTAACAGGCTTTTGGCCGATAGTTTGGTTGCTGCTGGAATCTCTCTCATATCCTAA 1053 0.4112 MEYSRSFLASFLLALLLNLSNGQPLVPALFIFGDSVVDVGNNNHKFTVMKANFPPYGRDFENHYPTGRFCNGKLATDFTAEVLGFTSYPPAYLNLNNKGNNLLNGANFASAASGYYEPTAKLYNAIPLRQQLEYYKECQNKLVEAAGQSSASSIISDAIYLVSAGTSDFIQNYYINPLLNKFYTIDQFSDTLLRFYSDFIQSLHALGARRIGVTSLPPIGCLPGAITLFGFNSNECVASLNSDAITFNVKLNTTSHNLQNMLPGLNLVVFDIYQPLYDLVTKPSENGFFEARKACCGTGLIETSILCNRKSIGTCTNSSEYVFWDSFHPSEAANRLLADSLVAAGISLIS* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0803 350 PANTHER GDSL-MOTIF LIPASE 10 349 - -
Vra2g0803 350 Gene3D SGNH hydrolase 20 346 IPR036514 -
Vra2g0803 350 CDD SGNH_plant_lipase_like 27 341 IPR035669 -
Vra2g0803 350 SUPERFAMILY SGNH hydrolase 142 343 - -
Vra2g0803 350 Pfam GDSL-like Lipase/Acylhydrolase 29 340 IPR001087 GO:0016788
Vra2g0803 350 PANTHER GDSL ESTERASE/LIPASE EXL3 10 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0803 Vra-Chr2 7206985 7209054 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0803 24 341 Acyl Lipid Metabolism Gene Families AT4G10950 33.022 2.15e-62 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0803 - - gmx:100775618 561.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0380 4 6696351 6698123 Vra2g0803 2 7206985 7209054 PCT