Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0742 ATGGCGGACGATACCGATTTCTGTTGCGTAAGGGAGAAAAGACTGGTGACGAGGTCTTCGACAGAGACATTGTCGAAGAAAGTTGCTGCGAGCACTTCCGCCTCTCCAAATCGCAAGTCGGAGCGGCTTGAGAAAAGGTCTCCACCGTCGTCCGGGGGCATAATGGATCCGAAGAGGAAGTTGAAGACACTGAATCCGTTGAGGAGATCCGAGAGAACGAGGAGCGCTTCTCCTTCGGATCCTTCTGCTTCCAGAAGTTCGGGTTCGGAAAAGCAGCAGAAGAAGCATTGCACTGGGAAGCGGTTGTTGTTTGAAGCCAGCAAGGATCGGGACGATGGAGATGAGGAACGAGGCATGGATGAGGAACGAGGCATGGAAGCTTCTTCGAGACCCAGAACTAGGAGAGTGACTGAGCATTGCCATGTGAAGACAAATGGGATGGATAGGTCAACTGAAGAAGGTGATGACGAGGGTGGGAGCAAGACTGATGGCTGTCTTAAAGGGAACTATTTAGATTCTGCCAATGACGATATGGATATTGAGCTGCCTGAAGATGCCACCGGTAAAGAGATGAGAGCTGAGCCTAAGTTGAGTGAGCCAGTGAAAGAACTGTCAGATTATGATGTGACTGTAAATCCATTGGTACCGTCTAATACTGCAAGTTGTGAGCCCAGTGGGTTACCTGAAAAGGTTCGGTTTGATTCATGCAAAGAGGAGAGATCACAAAGTTTAGGGTCAAGGGATTTCATATCAAATGAAAATTTGATTAGGGAACGTATTGAGCTTGATAAGGATGAAAAATCAATATCTTCTAAGAGAAAAAAAACAATGGTGGCCATGCATTCAGATGCTTCTACTTTGTTGGTGGACAATGACAATAACAGCAACTTGTTTGAGGATACTCGCCCGTCAAGGATATGCAGCAATGTTGTGGAGACCAGTGGGTCATGTTCCAAAAGGATAAGGCAGATCTCCTTAGCAGATGTGAAAAAGGATCAGAGGAAATCGACTGATAATGTTGACCAGTCCCCTTCAAAGATATCCACTAGGAACAAGAAAGACTCGGAGAGACCTCAAATGAACACTGCTGAAACTTACAAAATAAGGAAACAGCAGAGGAGCTTACATCTTTTACTGAAGCCAGAGATAGCAAATCTTTGTGAAATTCTGCATCTCCCTGATAATGTCAAAAGTATGGTTCAAAATTGTCTTGAATATACTATGAACAATTACCACATCTTTACAGAACCATTGCCAATATTACAGGCTTTTCAGCTATCTCTGTGTTTGACAATTGCTGCTTTGCTAAATCACAAACTCAACTTTGAAGCTTCCCTTTTGCTTGCAAAGCAGCATTTGAATTTTGACTGCAAAAAAGAAATTGTAGAGGAAATCAATTCAAGGCTTTGGGATCTGAAGGAAAGTTTTTTATCGCTCAAAGGAAACTCTAATGTTGCTGGCTGTGCAAAGGCTTCTGAATCGTCAAGTGGGGTTTATTCATATATTGAAGTGACACCTGAGGATGAATTGGTAAAAGTTGATAATTCTATAAATATTAAAACCGTTCAGAAACGTAAAAGCCAGTGGAACAAGCTACTTCTGATGCAAAGGGAAGAGAGGATAAAGTTAAAAAAAGATATTGAGAATGAAAATGCTGAAATTCAGAGAAGGCACCAGATAGAGTGGGAAGCTATTCGATCATGTTCTCCCGATGATTTGACTAAAGATGGAAAGCTTCAGGCTTCCAAAAGTGCTTACATGAAAAGAACTGAAGAATTGAATAGGCAGCAAGAAATACGTCTCAAGGATCTTGAGGTCAAGCAATTAAAAGCAAGGCTGATGTTCCAAGAGTCTTCAGCACCATATGAATTGTTAAACCCAATTGCTTCGATCAAACTCGGGCCAGTGGTCAAATCCTTACAGATTTGTGATCAAGCCCAACATCATAATGCTCCAAAAGTCCTTGCGTCTGATACAGTGGAAGTCAAGGCAAGGATTGAATCTGGGGTTGGATTATCTGAAGCTCCCGATGCCAATGCCTCTGTTGTTGCACCATTCAGTAGCACAGTTGAACTGCAAACTCGTCTTGTTAAACATGCTGATGATGAGATGGACATAGTCTCTTCAAAAGATGGACTAGTATCTGAAATTAAGTGCAGTAATATTGTTGAAAATGTATATGAAAGTCATGGAAATGTTATATCTAAACATTCCAAATCCAGAGAGCAACGTTCTGATAGAGCTATTAGAGTGCCAGAAAGGGAAGAGTATGTAAATTTTAATCATGAATCTCATAATGATTCTAGGCAGGATGCTGTAATACAGGTTCTTGCTTCATATAATGAAGACATATGTCACGGGGAAACACTAGATGTTCTTAGTGCAGAGGTGGCTCCTTCAGTCTGTAACACCAGCAGTTCTGAGAATGATCTTGTTGAAATTCCTTCTTCTAGGCAAAGGGAACTAAATGGGACTATACAGATCAAGCCTGTGTGTGGATCATCAATAGAAGTTGATGGTAATGGTTCCAATGATGGTGCAAAAAATATGGCCTTATTGAATTCTCAGTCATCCGAAGAACATATTCCAAGTGTAAATACCATGTGCACACCATATTGTGAGAATACTGCACAAATTCATGACGCTGATAACAATTATGGTTCAAAGAATGCTGACATTATGAACTCATCTTTGTGTGATGAAAGAATTTCCTCCTGGAATTCAAAATCACCTCAAGATTGTGTCCATAATGAAAATGGCAAGCACACTCTAGATTGTGAAAATTTTTCCCTTGATGGTGGTGGTTCAGATAATTTTATTCTTAATTCTCCTTTGGTTGATGAGAGAAATGCTGATAGGACCATAATATTACATAGAGATGCACATGTGGGAATACATGAGGCTGTCAATTTGACTTCATCCACTGAGCAAATATCTGGTGCAGTAAATGACTCAGTTTTTGATAGTGTGTTGCCAAAACCATATGGAGAGGATAGTTCCAGTAATAATAGCTCTGATGCTAATTCTATTCTTTCAAATCAAACTTCTATAGAGAAACAAAATCTTGATGGAGTCTCATCAAGCATACCTATTAGACAAATTCCAGTTGGAGTGCCAGAAACTAATGAGAGGGCCATTGTAAATGTATTAGATGAGGAGGAAGCTAGTTGGATGCCTGACGCTGTCAATTACCCTGACAATGTAATTCCTCATAATTCTTCATCCATGGATCAATTAGTTAATGGAGATCCAGTATTTGATGGCAGTTTGTCATCAAAGACTTGTACTACAAGCCCAAGCAATAACAAGAACCTACCTGATGAACACGTTTCTGTCTTGATGCCAGAAAATAGCCTTGGAGAGGTTGAATTCCAATTGACAAACAACGTGGATAGAAGTGCCACATTGGACCAGCAGGAAGGAGTATGTACAACCATGACTGAAAACAGTTCGTACCAGGAGACTCCAGTATCTAGACCTGTTGATGTTATGGAGTCTCTAGAACAAGTGCCATCTTTATCATTTGTGGAGTCTCCTCCTGATCTGGATACTTCTAGAGAAACACGGAACTATGTAGTATCTACTGTTGTTGATGTTGTACAAGCTAATCAATCCATTAATGATTCACTGGTCATGGAGCCTCCACAGGAGGGGCAATTTCCTTCTGTGGGTTTCTTCTCTTCCAACTGGGACCTATCCAACTTGCCTTTGGTGACCAGAACTGAAGATCAGCCACACAATGAAGATGATCTCATCGGCCATGTTCCTGGAACATTAATTGAGATTCAAAATCAAACTCGTGTGCAACATCCCTCAAATTCAGACCAGCAGGAAGGAGTGTGTAGAACCATGAATGGTAACAGTTTGTCCCAGGAGACTCCAGTATCTTTATCAGTTGATGATCTCATGGAGCCTCTTGAAGAAGTGCAACCATTATCATCCTTAGAGTCTCAACCTGACCAGAATACTACAATAGAAATGCAGAACAGTTTGGTATCAAGTTCTGTTGATACTGTACCAGCTAACGTATCTACAGATAATTCACTGGTCAGGGAACCACCCGAGAAGGAGGGTCAGTTACCTTCTGCAAATGTCCTTTCTTCCAATGATGGAGACCTGTCTATCTTGCCTACAGTGACTGGAACTGAAAACCAGCCATCCATTGAAAAGGATTTTCCCAACCACATTCCCGAGACATCAATTGAGATTCAAGATCACGATGTTGTGCAATGCGCCTCAAATGTGGAATTGGATCCAGCCTCAAATACGAACTTGGTTTCGCAAGAGCTTGCTGGAGTTAGACAACAGTCTTCAAACACAAGAAACCAGTCAACTCTCACAGAGATTAATAATCATCCTATACAACCTGCAAGCCAATCAGATTCCAGGATTATTCAACGTTTAGCTCTTGATCCGTTTAACTGTGAAATGACAAGACTACATCAACTGGCGGAGGATAATAAGAAAGACTTTGAAGAAAGGAAATTGAAGTTGAGACAGGATTTTGAGAAGGAACTCGAGGAACTTTACAAGAAGTTTGACATTAAACACAAGGAGAATGAAGCTGAAGTACAGAAAGTAAGGAAGGACCTGGACAAACAACATAGCATAGTTAATGTAAATATGAAATTGGCTGAGGCTTGTAGGGTTAAATCCATGGATTTTACACTACCTGGTGCACCAAACATGCACAAAGATGCAAGTTCTGTTCAGCAATTATTTCAGGTTGCAAGTCCACAAAATGCCACTGCGTTCAATGTGGTTGTCGGACCATCTTCTCGGGAGTATTCTGCAGCCAGCTTGCAGAGTTCCTATGCTACAACTACCTCACAGACTACGGTACCACCAATACAAGCCACGTACAGTACGCCCGGAACATTCTCCGTTACTTCTTCAAGACTACCACGTATCAACCCCCTCTCTTCACTCTTGGGAAATGTTCAAACTGGTGGGGAGATACGTGCCCCTGCACCACATCTCCACCCTTATAGAACACCAACGTCTGTCCCAGCCTCCACTTTCTGTACAGTTCTGCGTGGGAGATCAAGTCAGCCTGCACCCGGTAATATTCCTGTAACTTCCCCCCCGTTTTCTTACCAGACACCCTGGCCAGCGCTGGCAACCCTTCCATCTGTTCTACACGGGGGGCTTTGGCCACCCACTTTACCTGCCATTAATCCTCACACTGATCCTAACAGTCAACACGGCATATATTGGCCAAATGTTCGGCCACATATGCCAGATTTGCCTACGATGAACCTTTCTAAATGTGACAAAAGTAGTACAACGCCAGCAACCTCAGCTCATCCAGCTACATCATCTGATGTAGTCTGTTTATCAGATGATGAATGA 5352 0.4197 MADDTDFCCVREKRLVTRSSTETLSKKVAASTSASPNRKSERLEKRSPPSSGGIMDPKRKLKTLNPLRRSERTRSASPSDPSASRSSGSEKQQKKHCTGKRLLFEASKDRDDGDEERGMDEERGMEASSRPRTRRVTEHCHVKTNGMDRSTEEGDDEGGSKTDGCLKGNYLDSANDDMDIELPEDATGKEMRAEPKLSEPVKELSDYDVTVNPLVPSNTASCEPSGLPEKVRFDSCKEERSQSLGSRDFISNENLIRERIELDKDEKSISSKRKKTMVAMHSDASTLLVDNDNNSNLFEDTRPSRICSNVVETSGSCSKRIRQISLADVKKDQRKSTDNVDQSPSKISTRNKKDSERPQMNTAETYKIRKQQRSLHLLLKPEIANLCEILHLPDNVKSMVQNCLEYTMNNYHIFTEPLPILQAFQLSLCLTIAALLNHKLNFEASLLLAKQHLNFDCKKEIVEEINSRLWDLKESFLSLKGNSNVAGCAKASESSSGVYSYIEVTPEDELVKVDNSINIKTVQKRKSQWNKLLLMQREERIKLKKDIENENAEIQRRHQIEWEAIRSCSPDDLTKDGKLQASKSAYMKRTEELNRQQEIRLKDLEVKQLKARLMFQESSAPYELLNPIASIKLGPVVKSLQICDQAQHHNAPKVLASDTVEVKARIESGVGLSEAPDANASVVAPFSSTVELQTRLVKHADDEMDIVSSKDGLVSEIKCSNIVENVYESHGNVISKHSKSREQRSDRAIRVPEREEYVNFNHESHNDSRQDAVIQVLASYNEDICHGETLDVLSAEVAPSVCNTSSSENDLVEIPSSRQRELNGTIQIKPVCGSSIEVDGNGSNDGAKNMALLNSQSSEEHIPSVNTMCTPYCENTAQIHDADNNYGSKNADIMNSSLCDERISSWNSKSPQDCVHNENGKHTLDCENFSLDGGGSDNFILNSPLVDERNADRTIILHRDAHVGIHEAVNLTSSTEQISGAVNDSVFDSVLPKPYGEDSSSNNSSDANSILSNQTSIEKQNLDGVSSSIPIRQIPVGVPETNERAIVNVLDEEEASWMPDAVNYPDNVIPHNSSSMDQLVNGDPVFDGSLSSKTCTTSPSNNKNLPDEHVSVLMPENSLGEVEFQLTNNVDRSATLDQQEGVCTTMTENSSYQETPVSRPVDVMESLEQVPSLSFVESPPDLDTSRETRNYVVSTVVDVVQANQSINDSLVMEPPQEGQFPSVGFFSSNWDLSNLPLVTRTEDQPHNEDDLIGHVPGTLIEIQNQTRVQHPSNSDQQEGVCRTMNGNSLSQETPVSLSVDDLMEPLEEVQPLSSLESQPDQNTTIEMQNSLVSSSVDTVPANVSTDNSLVREPPEKEGQLPSANVLSSNDGDLSILPTVTGTENQPSIEKDFPNHIPETSIEIQDHDVVQCASNVELDPASNTNLVSQELAGVRQQSSNTRNQSTLTEINNHPIQPASQSDSRIIQRLALDPFNCEMTRLHQLAEDNKKDFEERKLKLRQDFEKELEELYKKFDIKHKENEAEVQKVRKDLDKQHSIVNVNMKLAEACRVKSMDFTLPGAPNMHKDASSVQQLFQVASPQNATAFNVVVGPSSREYSAASLQSSYATTTSQTTVPPIQATYSTPGTFSVTSSRLPRINPLSSLLGNVQTGGEIRAPAPHLHPYRTPTSVPASTFCTVLRGRSSQPAPGNIPVTSPPFSYQTPWPALATLPSVLHGGLWPPTLPAINPHTDPNSQHGIYWPNVRPHMPDLPTMNLSKCDKSSTTPATSAHPATSSDVVCLSDDE* 1784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0742 1783 PANTHER HELICASE PROTEIN MOM1 1189 1273 IPR039322 GO:0031507
Vra2g0742 1783 PANTHER HELICASE PROTEIN MOM1 1268 1324 IPR039322 GO:0031507
Vra2g0742 1783 PANTHER HELICASE PROTEIN MOM1 140 759 IPR039322 GO:0031507
Vra2g0742 1783 PANTHER HELICASE PROTEIN MOM1 1328 1783 IPR039322 GO:0031507
Vra2g0742 1783 PANTHER HELICASE PROTEIN MOM1 1 137 IPR039322 GO:0031507
Vra2g0742 1783 PANTHER HELICASE PROTEIN MOM1 778 1185 IPR039322 GO:0031507
Vra2g0742 1783 MobiDBLite consensus disorder prediction 1332 1371 - -
Vra2g0742 1783 MobiDBLite consensus disorder prediction 1266 1292 - -
Vra2g0742 1783 MobiDBLite consensus disorder prediction 61 75 - -
Vra2g0742 1783 MobiDBLite consensus disorder prediction 1435 1461 - -
Vra2g0742 1783 MobiDBLite consensus disorder prediction 185 203 - -
Vra2g0742 1783 MobiDBLite consensus disorder prediction 1750 1783 - -
Vra2g0742 1783 MobiDBLite consensus disorder prediction 989 1009 - -
Vra2g0742 1783 Gene3D - 1470 1551 - -
Vra2g0742 1783 MobiDBLite consensus disorder prediction 995 1009 - -
Vra2g0742 1783 MobiDBLite consensus disorder prediction 89 114 - -
Vra2g0742 1783 Coils Coil 1481 1512 - -
Vra2g0742 1783 MobiDBLite consensus disorder prediction 1754 1774 - -
Vra2g0742 1783 MobiDBLite consensus disorder prediction 120 162 - -
Vra2g0742 1783 PANTHER - 1328 1783 - -
Vra2g0742 1783 PANTHER - 140 759 - -
Vra2g0742 1783 PANTHER - 1189 1273 - -
Vra2g0742 1783 PANTHER - 1 137 - -
Vra2g0742 1783 PANTHER - 1268 1324 - -
Vra2g0742 1783 PANTHER - 778 1185 - -
Vra2g0742 1783 MobiDBLite consensus disorder prediction 328 361 - -
Vra2g0742 1783 MobiDBLite consensus disorder prediction 18 180 - -
Vra2g0742 1783 Coils Coil 533 557 - -
Vra2g0742 1783 MobiDBLite consensus disorder prediction 21 37 - -
Vra2g0742 1783 Coils Coil 587 607 - -
Vra2g0742 1783 MobiDBLite consensus disorder prediction 1332 1349 - -
Vra2g0742 1783 MobiDBLite consensus disorder prediction 185 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0742 Vra-Chr2 6511951 6522016 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0742 - - vun:114170579 2896.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0336 4 6085615 6109211 Vra2g0742 2 6511951 6522016 PCT