Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0519 ATGCAGAGGGCACCACTTGCACATTCCCATGAATTCGCCTTGAAGGAGACCTCTCCCAACATTGGGGCAGGGGCAGTGACAAGGGACAAGCTGTCATGCACCTATGACCTTGTTGAACAGATGCAGTATCTCTATGTTCGTGTGGTGAAAGCCATGGACTTACCTGCAAAAGATGTCACCGGAAGTCTCGATCCCTATGTCGAAGTGAAGCTTGGAAACTTCAAGGGAGTGACCAAGCATTTTGAGAAGAAGTCGAACCCTGAGTGGAATCAGGTCTTTGCCTTCTCAAAAGATCGGATTCAAGCCTCAGTGTTGGAGGTAATTGTGAAAGATAAGGATGTTATTTCAGATGACTTTGTGGGGAGGGTGTGGTTTGATCTGAATGAGATCCCAAGACGTGTTCCCCCAGACAGTCCTTTGGCTCCACAGTGGTACAGACTGGAAGATCGCAAGGGTGTAAAGGTCAAAGGAGAGTTAATGCTCGCAGTTTGGATGGGGACTCAAGCAGATGAGGCATTTCCTGATTCTTGGCACTCTGATGCAGCCATGGTTGGCTCCGAAGCAGTTGCCAACATAAGGTCAAAAGTTTACCTCTCTCCCAAGCTCTGGTATGTAAGGGTCAATGTGATTGAAGCGCAGGATTTGATTCCTACTGACAAGAGCAGGTATCCTGAAGTTTTTGTGAAGGTTAATCTTGGGAGCAAGTTTGTGAGAACAAGAGTGTCTCAAAGTAAAAACATAAGTCCTATGTGGAACGAGGATTTGATGCTGGTTGCTGCGGAGCCGTTTGAGGATCCCTTGATTCTGACTGTGGAAGACAGGGTTGGACCAAACAAAAATGAGATTCTGGGAAGGTGTGTGATCCCTTTGCAGATTGTGCAACGGAGGCTGGACCATAAGCCTGTGAACAGCAGGTGGTTTAATCTTGAGAAGCATGCGGTTGTTGAAGGGGAGAAGGAGAGTAAATTCGCAAGCAAGATACATTTGAGGGTGTGCTTGGATGGTGGGTTCCATGTGTTGGATGAGTCAACTCATTACAGCAGTGATCTTAGACCAACTGCTAAGCAGCTATGGAAGCCTAGCATTGGAATTCTAGAAGTGGGGATTATAAGTGCACTGGGGCTTATGCCGATGAAGACAAGAGATGGCAGAGGAACCACAGATGCTTATTGTGTGGCAAAATATGGCCAGAAGTGGATCCGCACTAGGACTATTGTAGATAGCTTCACTCCAAAGTGGAATGAGCAATACACTTGGGAAGTGTTTGATCCATGCACTGTTATTACCATAGGAGTCTTCGACAATGGTCGTGTAGGAGGAGGAGATAAAGCTAGTGAAACAAAGGATTCTAGGATAGGGAAGGTGAGAATCAGGCTATCCACACTCGAAGCTGATAGAGTTTACACACATTCATATCCTCTTTTAGTACTTCATACTTCAGGTTTGAAGAAAACAGGAGAAGTGCAATTGGCCGTGAGGTTCACAAGCTCATCTTTCATCAATATGTTGTACATGTATTCCCAGCCTCTGCTGCCAAAGATGCACTACATCCATCCTTTATCTGTGATTCAGCTGGACAGTCTGAGGCATCAGGCCATGCAGATTGTATCAATGAGGTTGAGCAGAGCTGAGCCACCCCTAAGGAAAGAGGTTATAGAATACATGCTTGATGTGGATTCGCATATGTGGAGTATGAGAAGGAGCAAAGCCAATTTCTTCAGGATAATGAAAGTTCTAGGTGGTTTGATAGCCTTTGGGAGGTGGTTTGATCAGATATGCAACTGGAAAAACCCCATCACCACCATTCTAATTCATGTCCTTTTCATAATATTGGTTCTTTACCCTGAGCTAATACTTCCCACAATCTTCTTGTACCTGTTCTTGATTGGAATCTGGAACTTCAGATGGAGGCCTAGACACCCTCCACACATGGATACCAGGCTGTCTCATGCTGATGCTGCTCATCCTGATGAATTAGATGAAGAGTTTGATTCATTCCCAACTTCACGGTCACAGGATATTGTTAGGATGAGATATGACCGTTTAAGAAGCATTGCAGGGAGAGTCCAAAGTGTTGTAGGAGACTTAGGTACACAAGGAGAAAGGTTCCAGAGTCTGCTAAGCTGGAGAGATCCAAGGGCTACCACACTCTTTCTCACATTCTGTTTCATTGCTGCTATAGTTCTCTATGTTACTCCCTTTCAAGTTGTGTCACTTCTCATTGGCTTCTACATGCTTAGACACCCCAGATTCCGCAGGAAACTTCCATCAGTCCCACTCAACTTCTTCAGAAGGATGCCTGCTAGATCAGACAGCATGTTGTAA 2325 0.4533 MQRAPLAHSHEFALKETSPNIGAGAVTRDKLSCTYDLVEQMQYLYVRVVKAMDLPAKDVTGSLDPYVEVKLGNFKGVTKHFEKKSNPEWNQVFAFSKDRIQASVLEVIVKDKDVISDDFVGRVWFDLNEIPRRVPPDSPLAPQWYRLEDRKGVKVKGELMLAVWMGTQADEAFPDSWHSDAAMVGSEAVANIRSKVYLSPKLWYVRVNVIEAQDLIPTDKSRYPEVFVKVNLGSKFVRTRVSQSKNISPMWNEDLMLVAAEPFEDPLILTVEDRVGPNKNEILGRCVIPLQIVQRRLDHKPVNSRWFNLEKHAVVEGEKESKFASKIHLRVCLDGGFHVLDESTHYSSDLRPTAKQLWKPSIGILEVGIISALGLMPMKTRDGRGTTDAYCVAKYGQKWIRTRTIVDSFTPKWNEQYTWEVFDPCTVITIGVFDNGRVGGGDKASETKDSRIGKVRIRLSTLEADRVYTHSYPLLVLHTSGLKKTGEVQLAVRFTSSSFINMLYMYSQPLLPKMHYIHPLSVIQLDSLRHQAMQIVSMRLSRAEPPLRKEVIEYMLDVDSHMWSMRRSKANFFRIMKVLGGLIAFGRWFDQICNWKNPITTILIHVLFIILVLYPELILPTIFLYLFLIGIWNFRWRPRHPPHMDTRLSHADAAHPDELDEEFDSFPTSRSQDIVRMRYDRLRSIAGRVQSVVGDLGTQGERFQSLLSWRDPRATTLFLTFCFIAAIVLYVTPFQVVSLLIGFYMLRHPRFRRKLPSVPLNFFRRMPARSDSML* 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0519 774 SMART C2_3c 364 471 IPR000008 -
Vra2g0519 774 SMART C2_3c 204 302 IPR000008 -
Vra2g0519 774 SMART C2_3c 43 139 IPR000008 -
Vra2g0519 774 Pfam Plant phosphoribosyltransferase C-terminal 619 774 IPR013583 -
Vra2g0519 774 PANTHER ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE-LIKE PROTEIN 8 774 - -
Vra2g0519 774 ProSiteProfiles C2 domain profile. 25 145 IPR000008 -
Vra2g0519 774 ProSiteProfiles C2 domain profile. 346 472 IPR000008 -
Vra2g0519 774 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 43 181 IPR035892 -
Vra2g0519 774 Gene3D C2 domain 188 333 IPR035892 -
Vra2g0519 774 CDD C2C_MCTP_PRT_plant 204 352 - -
Vra2g0519 774 CDD C2B_MCTP_PRT_plant 43 167 - -
Vra2g0519 774 Pfam C2 domain 203 309 IPR000008 -
Vra2g0519 774 Pfam C2 domain 43 145 IPR000008 -
Vra2g0519 774 Pfam C2 domain 363 474 IPR000008 -
Vra2g0519 774 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 8 774 - -
Vra2g0519 774 Gene3D C2 domain 361 498 IPR035892 -
Vra2g0519 774 Gene3D C2 domain 42 164 IPR035892 -
Vra2g0519 774 CDD C2D_MCTP_PRT_plant 364 491 - -
Vra2g0519 774 ProSiteProfiles C2 domain profile. 183 307 IPR000008 -
Vra2g0519 774 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 363 500 IPR035892 -
Vra2g0519 774 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 203 354 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0519 Vra-Chr2 4047402 4050270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0519 1 774 Lipid Metabolism Gene Families AT3G57880 80.670 0.0 1341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0519 - - gmx:100788273 1458.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0172 4 4523923 4526798 Vra2g0519 2 4047402 4050270 PCT