Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0093 ATGGCGAAGTTTGCAGGATATTCCCTGGCCGTTTCATTTGCTCCCACAGGTTCCAACATCCTTAAAAACAATGGCAGATTCCCACTAGTTATATCTCGTAGGAATAAGTTCAGCTATAGGTTATTTTCTACTCGTACTCTGAAAGCACAATTACATGATAAGCCTGGGGTGGTTTCCAGATACTACCTTCCTCCTTGGTTTAGTGTTGCTCCAATGATGGAATGGACGGACAATCACTATAGGACTCTAGCACGCCTCATATCAAAACATGCTTGGCTGTACACGGAGATGGTTGCAGCTGAAACAATTGTTCATCAAAAGGACAATCTGGACAGATTCTTGGCATATTCTCCAGACCAACACCCCATTGTGCTTCAAATTGGAGGGAGCAATATAGAAAATTTGGCTAAAGCAACTGAGCTTGCTAATGCTTATTGTTATGACGAGATCAACTTAAACTGTGGATGTCCTAGTCCAAAAGTTGCTGGTCATGGGTGTTTTGGTGTGAGTCTCATGCTTAACCCCAAGTTTGTTGCTGAGGCCATGTCAGCAATTGCTGCCACCACGAATGTACCTGTCAGTGTCAAATGTCGAATTGGTGTGGATGATCATGATTCTTATAATGAGCTTTGTGATTTCATATACCAGGTTTCTTCTTTATCACCCACTAAGCATTTTATAATTCACTCAAGGAAAGCACTGCTCAATGGTATTAGCCCTGCTGAGAATAGAAGCATTCCTCCACTAAAATATGAATACTTCTATGGCCTCCTACGTGACTTTCCTGACCTAACATTTACAATCAATGGCGGCATTACTAGTGTTGAAGAGGTCCGTGCGGCTCGAGAAGCTGGGGCTCATGGTGTTATGGTCGGACGTGCAGCGTACACCAATCCTTGGCATATTTTGGGGCACATAGATTCTGCAATTTATGGCACACCAAGTCCTGAGCTTACACGTCGTCAGGTCCTTGAAAAATATCTAACCTATGGGGAATCGGTCATGGGAAAATATGGACGTAGGCCAACTATGCGAGATATTATGAAGCCTTTACTCAATCTTTTCCATTCAGAACCTGGGAATGGACTTTGGAAGCGCAAAGCTGATGCTGCTTTCAAAAATTGCACGACTGTCGAATCATTTTTTGAAGAAACCCTTGTCGCAATTCCCGACTCAGTATTGGATTCGCCTGTTGCCAAACTACCACCTGGCCGTAGAGATCTTTTTGCCAACATGCACAATTTATTGCCTCCGCCATACAGAACAAGAGAGGAGGCAGTAGTCATTTGCGCTTAA 1296 0.4352 MAKFAGYSLAVSFAPTGSNILKNNGRFPLVISRRNKFSYRLFSTRTLKAQLHDKPGVVSRYYLPPWFSVAPMMEWTDNHYRTLARLISKHAWLYTEMVAAETIVHQKDNLDRFLAYSPDQHPIVLQIGGSNIENLAKATELANAYCYDEINLNCGCPSPKVAGHGCFGVSLMLNPKFVAEAMSAIAATTNVPVSVKCRIGVDDHDSYNELCDFIYQVSSLSPTKHFIIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVEEVRAAREAGAHGVMVGRAAYTNPWHILGHIDSAIYGTPSPELTRRQVLEKYLTYGESVMGKYGRRPTMRDIMKPLLNLFHSEPGNGLWKRKADAAFKNCTTVESFFEETLVAIPDSVLDSPVAKLPPGRRDLFANMHNLLPPPYRTREEAVVICA* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0093 431 SUPERFAMILY FMN-linked oxidoreductases 66 367 - -
Vra2g0093 431 Gene3D - 315 379 - -
Vra2g0093 431 Pfam Dihydrouridine synthase (Dus) 69 377 IPR035587 -
Vra2g0093 431 CDD DUS_like_FMN 67 311 IPR035587 -
Vra2g0093 431 Gene3D Aldolase class I 63 309 IPR013785 -
Vra2g0093 431 PANTHER TRNA-DIHYDROURIDINE SYNTHASE 58 428 - -
Vra2g0093 431 PANTHER FMN-LINKED OXIDOREDUCTASES SUPERFAMILY PROTEIN 58 428 IPR004653 GO:0002943|GO:0017150
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0093 Vra-Chr2 739058 743927 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0093 K05539 - gmx:100779457 781.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0093 2 739058 743927 Vra5g2055 5 26163559 26171775 PCT