Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1067 ATGAAGTTCCAAGACAGTGAGCATCATCCCTTTGGGAACACCACCATGACTTCAAAGCACATGATCCCAAAACTCACCTTGCTAGCAATCATGGTGATCCTAACACTTGCCATCACTCCTTTGTGGTACCCTTTTTGCAGTTACCATTCATCATCAGTCTTGAAGATGAAGCACATTCATGATGATGATGATAATGATGCTATGGCAGAAAAGCTTCCCTCAACATATGTAGAGAAGTGTGACATTTTCACAGGGGAATGGGTGCCAAACCCTAAGGCACCCTATTACACAAACAAGACTTGTTGGGCCATTCATGAACACCAGAACTGCATGAAGTATGGAAGACCTGATTCTGAGTTCATCAAGTGGAGATGGAAGCCTAGTGATTGTGAACTCCCCATTTTCAACCCTTTTCAGTTCTTGGAAATTGTTAAAGGAAAATCCATGGCCTTTGTTGGTGACTCTGTGGGAAGGAATCAGATGCAGTCCATGATTTGTCTCCTTTCTAGAGTGGAATGGCCAATAGATATATCATACACAAGAGATGAGTACTTCAAGAGATGGAAGTATCCTAGTTACAACTTCACCATGGCCACATTTTGGACACCCCATCTGGTAAGAACCAAAGTGGCTGACCCAAATGGTCCAAGCAACACTGGCCTTTTCAACCTCTACCTAGATGAGTATGATGAGAAATGGACCACACAAGTTGAAGAATTTGACTACATAATTCTTGATGGAGGGCATTGGTTCTACAGACCAATGGTGTTCTATGAGAGAAAAAAGGTTGTCGGGTGCCATTTCTGTCTCTTGGAAAATGTCCCTGACCTGACCATGTTCTATGGGTATAGAAGGGCTTTTAGGACAGCTTTTAAGGCCATCAATAGTTTGGAAGACTTCAAGGGCACAGTTTTTCTTAGGACATTTGCACCATCTCATTTTGAGAATGGGATATGGAATGAAGGTGGGAACTGTTTGAGAACTAAACCATTTAGGAGTAATGAGACACGATTAGAGGGCACAAATTTGGAGCTTTATATGATCCAATTGGAGGAGTTTAGGAAAGCTGAGACAGAAGGGAGAAAGAAGGGTTTGAAATTTAAGTTAATCGACACGACACAAGCAATGTTACTAAGACCGGATGGACATCCTAGTAGATATGGACATTGGCCTAATGAGAATGTTACATTGTATAATGATTGTGTTCATTGGTGCTTGCCGGGACCCATAGACACATGGAGTGATTTCTTGCTACAAATGTTGAAGATGGAGGGAATGAGATCAGCAATAAGCTAG 1296 0.4198 MKFQDSEHHPFGNTTMTSKHMIPKLTLLAIMVILTLAITPLWYPFCSYHSSSVLKMKHIHDDDDNDAMAEKLPSTYVEKCDIFTGEWVPNPKAPYYTNKTCWAIHEHQNCMKYGRPDSEFIKWRWKPSDCELPIFNPFQFLEIVKGKSMAFVGDSVGRNQMQSMICLLSRVEWPIDISYTRDEYFKRWKYPSYNFTMATFWTPHLVRTKVADPNGPSNTGLFNLYLDEYDEKWTTQVEEFDYIILDGGHWFYRPMVFYERKKVVGCHFCLLENVPDLTMFYGYRRAFRTAFKAINSLEDFKGTVFLRTFAPSHFENGIWNEGGNCLRTKPFRSNETRLEGTNLELYMIQLEEFRKAETEGRKKGLKFKLIDTTQAMLLRPDGHPSRYGHWPNENVTLYNDCVHWCLPGPIDTWSDFLLQMLKMEGMRSAIS* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1067 431 Pfam PMR5 N terminal Domain 78 131 IPR025846 -
Vra1g1067 431 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 23 424 IPR029962 GO:0016413
Vra1g1067 431 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 132 420 IPR026057 GO:0016740
Vra1g1067 431 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 19 23 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1067 Vra-Chr1 12903666 12910438 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1067 - - gmx:100817694 786.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g1241 4 19396325 19401015 Vra1g1067 1 12903666 12910438 PCT