Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1163 ATGGACTCTTCTAAGAGGCTTGCATTCTCGGAACCCATTATGTCTCAGAGGAGAAAGGTGATTTCAGGGTTCAGTTTAGGCGTTGGAGTTTCTCTTTTTTTTGTTACCGTTATCTTGCTCAACAACACTTCACTCACTGTTCCCAAGGTTCAACTGTTTCTCCAAGGATCCGATTTCAATTCTTCTTTTTCTTGGCGTTTTCCCTTCTCGGCCCGTTATTTCAATGATTCCGTGAGTTCTCTGCACAGGGCTGAAGTCAATGTGTGGAGTGAGGGTTCGGAGAAGAAGACCCTTTTGGGGAATCTCACTGGGGATCAGAAAAATGCAAGCTTGCATGATGGCCATGAGGAACATGAAGACTGTTGTTCTTTGAAGAATGTTACTGTGTCAGGGGAGGAAAATGGGCGCGTGGGAAATTCGTCATGCAGTGGTGATGATGCTTTGGGAAAGTGTGAAAAAGGGTTGGTTAAGGCAAGTAATCGCAGTGCTGGTAGTTTGTTTGGGGAATGTGATATCTTCGATGGGAAATGGGTGAGGGATGAGTCGAAACCTTACTATCCCTTGGGGTCTTGTCCTCTCATTGATAGGGATTTTGATTGCCATCTTAATGGGAGGCCTGATAATGAGTATGTGAAGTGGAGATGGCAGCCGAATAGGTGTGACATTCCAAGTTTGAATGCGACTGATTTTCTGGAAAAGTTGCGAGGACAGAGGCTGGTTTTTGTGGGGGACTCACTGAACAGGAACATGTGGGAGTCCATGGTGTGTATCCTGCGTCAAAGTGTCAGGGACAAGAAACGTGTTTTTGAAATTTCAGGAAAAACAGAATTTAAGAAGAAAGGTGTCTATGCTTTTAGATTTGAGGATTATAATTGTTCAGTAGATTTTGTTAGCTCTCCTTTCATGGTTCAAGAGTCAACTTTCAAGGGCACAAATGGGTCCTTTGAGACATTAAGATTGGATTTGATGGATCAGACAACTACCACCTATCATGATGCTGACATCATAGTCTTCAATACAGGTCACTGGTGGACTCACGAGAAAACATCTAGGGGAGAGGACTATTATCAAGAAGGCAACCATATATACCCCAGACTCAAAGTTCTGGATGCATATACAAGGGCATTGACCACTTGGGCTAGATGGATTGACAACAATATTGATGCCAATCGAACTCAGGTTTTCTTCAGAGGATACTCGGTCACCCATTTCAGGGGTGGGCAATGGAATTCAGGAGGACAGTGCCACAAAGAAACTGAGCCAATATCTGATGGAAAGCACTTGCGCAAGTATCCTTCGAAAATGAGGGCTTTGGAGCGTGTGGTCATGCCAAAGATGAAAACTTCCGTGATATATATGAACATTAGTAGGCTTACAGATTTCAGAAAAGATGGGCATCCCTCTATATACAGAATGGAGTATAAGACAGCAGAGGAGCAAGCCTCTGCTGAACTTCACCAAGATTGCAGTCATTGGTGTTTGCCTGGAGTACCTGATACTTGGAATGAATTACTCTATGCTTCTCTATTGAAATATGGTAAAGGCCATTGGAAAAGTTGA 1560 0.4346 MDSSKRLAFSEPIMSQRRKVISGFSLGVGVSLFFVTVILLNNTSLTVPKVQLFLQGSDFNSSFSWRFPFSARYFNDSVSSLHRAEVNVWSEGSEKKTLLGNLTGDQKNASLHDGHEEHEDCCSLKNVTVSGEENGRVGNSSCSGDDALGKCEKGLVKASNRSAGSLFGECDIFDGKWVRDESKPYYPLGSCPLIDRDFDCHLNGRPDNEYVKWRWQPNRCDIPSLNATDFLEKLRGQRLVFVGDSLNRNMWESMVCILRQSVRDKKRVFEISGKTEFKKKGVYAFRFEDYNCSVDFVSSPFMVQESTFKGTNGSFETLRLDLMDQTTTTYHDADIIVFNTGHWWTHEKTSRGEDYYQEGNHIYPRLKVLDAYTRALTTWARWIDNNIDANRTQVFFRGYSVTHFRGGQWNSGGQCHKETEPISDGKHLRKYPSKMRALERVVMPKMKTSVIYMNISRLTDFRKDGHPSIYRMEYKTAEEQASAELHQDCSHWCLPGVPDTWNELLYASLLKYGKGHWKS* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1163 519 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 11 517 - -
Vra11g1163 519 Pfam PMR5 N terminal Domain 169 221 IPR025846 -
Vra11g1163 519 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 222 507 IPR026057 GO:0016740
Vra11g1163 519 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 11 517 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1163 Vra-Chr11 11699072 11703580 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g1163 - - gmx:100804622 932.169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1630 7 34753186 34757171 Vra11g1163 11 11699072 11703580 PCT