Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0886 ATGGGACTTGTGGAGCTTCTGTTGGTGGCATCCATGCCGGTGATCAAAATACTGCTAATCACTGCTGTTGGCTTAGTTCTTGCACTGGAAAACATAAATTTATTGGGAAAAGATGCAAGGATACAAGTGAATAATCTTGTACATTACGTGCTTTATCCTGCTCTGGTGGGTGGCAATTTGGCTGACACTATTACTTCTGAGAATGTTGTTTCACTGTGGTTCATGCCCGTCAATATCCTCATCACGTTTATAATAGGCTCAGCCTTAGGATGGATCCTTGTAAAATTAACAAGGCCTCCCAAACACTTGGAAGGACTAATAATTGGTGTCTGTTCTGCAGGAAATTTAGGAAACTTGCCTGTAATCATTATCCCGGATATATGTAAAGACAAAGGTAGTCCTTTCGGAGACTCCAATGTCTGCTATGAATACGGAATGGCTTATGCTTCACTTTCTATGGCGGTTGGAGCTGTTTACATATGGATTTATGTCTACAACATAATGAGAATTTCAGCAAGTATAGTTCCCAAAGAAGAACATAGAACTAGCTCATTCACACAGGAGGCTTCAGGAGAGATACTAGATTTCCTCTCTGAGGAAGAAGACCCAAAAAATCCTGATAATGATGCATACACCCTATTGCTTTCTTCAAATCAATCCGAGGAGAAAGTGAAGGTATCAATCTCAGCTAAAATCAAAGACTCATTAGGAAAGTTTTTTGGCAACTCCAATTTCAAAGCCGTATTTTCACCAACAACTATTGGATCGATTGTTGGGTTTATTGTTGGGGTGGTTCCCCTGATACATAAACTCATGATTGGCAGCGACGCGCCACTTCATGTGATTGAAGACTCTGTTACCATGTTGGGTGAAGCTACAATCCCAGTTATAACTCTTATAATGGGAGCAAACCTCCTTAAAGGCTTGAAGGGAGCAGATACTTCATTCTGTACAATCATTGGAATATTAGTAGTTCGATATATCATACTTCCAATTTTGGGTATTCTAGTTATTAAAGGAGCGACTCAATTGGGTTTGGTGCAACCGGATCCCTTGTATCAGTTTGTTCTTCTCCTTGAATATGCACTTCCTCCAGCAATGGCTATTGGAACCATTGCCCAGCTGTTTGGAGCAGGTGAAGGTGAATGTTCAGTTATCATGCTATGGACATATGTTTTGGCGTCAGTTGCAGTCACTTTATGGTCAACCTACTTCATGTGGCTTGTGGCTTAA 1233 0.4079 MGLVELLLVASMPVIKILLITAVGLVLALENINLLGKDARIQVNNLVHYVLYPALVGGNLADTITSENVVSLWFMPVNILITFIIGSALGWILVKLTRPPKHLEGLIIGVCSAGNLGNLPVIIIPDICKDKGSPFGDSNVCYEYGMAYASLSMAVGAVYIWIYVYNIMRISASIVPKEEHRTSSFTQEASGEILDFLSEEEDPKNPDNDAYTLLLSSNQSEEKVKVSISAKIKDSLGKFFGNSNFKAVFSPTTIGSIVGFIVGVVPLIHKLMIGSDAPLHVIEDSVTMLGEATIPVITLIMGANLLKGLKGADTSFCTIIGILVVRYIILPILGILVIKGATQLGLVQPDPLYQFVLLLEYALPPAMAIGTIAQLFGAGEGECSVIMLWTYVLASVAVTLWSTYFMWLVA* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0886 410 Pfam Membrane transport protein 10 401 IPR004776 GO:0016021|GO:0055085
Vra11g0886 410 PANTHER AUXIN EFFLUX CARRIER FAMILY PROTEIN 1 410 - -
Vra11g0886 410 PANTHER - 1 410 IPR045033 GO:0080162
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0886 Vra-Chr11 7592515 7596852 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0886 K24139 - gmx:100785182 669.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0886 11 7592515 7596852 Vra11g0886 11 7592515 7596852 ECH
Vra11g0886 11 7592515 7596852 Vra7g0238 7 3683258 3686316 PCT