Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0651 ATGGTTTTTCCCTGTGTCTGTCTCAATTCCTCCATGCTCAGCACACCTTCACCTCTCTTTCTCGCTCCTCCTTTCCGCAGTCTCACGCTGCTTCCCAATCCCACCAAACCACCACCGCCAAAACTCTCATCTTTTCACCCTCTCTCAGTCTCTGCTGTGCCCGCTAAGGTAGACACCGCTGTGAGAATACCGGAAATCGAAGATTTTGATTTCAAAGTCTACATGCTCCACAAGGCCCACACGGTGAACCAAGCCTTGGACGCAGCCATTGCGCTGCGCGACCCGGAGAAGATCCACAAAGCCATGCGCTACTCCCTCCTCGCCGGGGGCAAGAGGGTCCGCCCCATCCTCTGCATAGCTGCCTGCGAGCTCGTCGGTGGCGATCATGCCACTGCCATCCCAGCAGCCTGTGCTGTCGAGATGATCCATACCATGTCGCTCATCCATGACGATCTGCCCTGCATGGACAACGATGACCTCCGCCGCGGCAAGCCCACCAACCACAAGGTCTTTGGTGAGGATGTGGCGGTTCTTGCTGGTGATGCGCTGCTTGCGTTCGCGTTCGAACACTTGGCGGCAGCAACCGAGGGTGTGTCCCCGGCGCGCGTGGTTCGTGCGATTGGGGAGTTAGCGAAATCCATAGGAGGAGATGGTCTTGTGGCAGGACAGGTGGTGGATTTAGATTCGGAAGGAGCATCGAATGTGGGGCTGGAGAGGTTGGAATTCATTCATGTGCACAAAACGGCGGCGTTGCTGGAAGCTGCGGTTGTGTTAGGCGCAATAGTGGGAGGTGGGTCGGATGAGGAGATTGAGAAATTAAGGAAGTTCGCCAGGTGCATTGGATTGTTGTTTCAGGTGGTGGATGACATTCTGGATGTAACGAAGTCATCCGAGGAATTGGGGAAGACGGCGGGGAAGGATTTGGTGGCGGATAAGGTCACGTACCCTAAACTTTTAGGGATACAGAAGTCCAAAGAGTTTGCTGAGAAACTGTTGCTGGAAGCGAAGGAACAATTGTTTGGATTTGATCCCCGAAAGGCAGCTCCTTTATTTGCATTAACCAATTACATTGCTTACAGGCAAAGTTAA 1089 0.5372 MVFPCVCLNSSMLSTPSPLFLAPPFRSLTLLPNPTKPPPPKLSSFHPLSVSAVPAKVDTAVRIPEIEDFDFKVYMLHKAHTVNQALDAAIALRDPEKIHKAMRYSLLAGGKRVRPILCIAACELVGGDHATAIPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHLAAATEGVSPARVVRAIGELAKSIGGDGLVAGQVVDLDSEGASNVGLERLEFIHVHKTAALLEAAVVLGAIVGGGSDEEIEKLRKFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLVADKVTYPKLLGIQKSKEFAEKLLLEAKEQLFGFDPRKAAPLFALTNYIAYRQS* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0651 362 ProSitePatterns Polyprenyl synthases signature 1. 147 163 IPR033749 -
Vra11g0651 362 SFLD Isoprenoid Synthase Type I 76 360 - -
Vra11g0651 362 CDD Trans_IPPS_HT 94 360 IPR000092 GO:0008299
Vra11g0651 362 SFLD Polyprenyl Transferase Like 76 360 - -
Vra11g0651 362 ProSitePatterns Polyprenyl synthases signature 2. 280 292 IPR033749 -
Vra11g0651 362 Pfam Polyprenyl synthetase 96 332 IPR000092 GO:0008299
Vra11g0651 362 Gene3D Farnesyl Diphosphate Synthase 65 362 IPR008949 -
Vra11g0651 362 PANTHER GERANYLGERANYL PYROPHOSPHATE SYNTHASE, CHLOROPLASTIC 47 361 - -
Vra11g0651 362 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 47 361 - -
Vra11g0651 362 SUPERFAMILY Terpenoid synthases 74 340 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0651 Vra-Chr11 5212211 5213519 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0651 K13789 - gmx:100778289 509.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0651 11 5212211 5213519 Vra11g0651 11 5212211 5213519 ECH
Vra11g0651 11 5212211 5213519 Vra7g0035 7 946323 947787 PCT