Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0455 ATGAAGGCAAAGAGAGGGAAACGCCCTGAGGCGTTCTGGCCTTCCATTGTGATGAAGAAATGGTTAAACATCAAGCCCAAGGTGAATGACTTCAGTGAAGATGAAGTGGACACTGAAACTGAGAGTGAAGATGATGCTTGTTCTCTTAGAGGCTCAAGAATGCGTGAAGATAAACCCTCCCTTCGAGCACAAGAGATTCCATCCAAATTCTCAAGTCAAAGATCAGATGCATCTAGTAAGGGCCACAAGGCAAGACACAGAAGAGGAAAATCTGAAACTCTGCGAGCTCAGTACATAAACACAAAGGAAGTGAGGGTAACAATTGGCACATGGAATGTTGCTGGAAGACATCCCTCTGAGGATCTTGAAATTGATGACTGGCTCTGTACTGAAGACCCAGCTGATATTTACATTCTCGGTTTTCAGGAGGTAGTTCCACTGAATGCCGGAAATGTGCTAGGAGCAGAAGATAATACACCTATCCAAAAATGGGAGGCAATCATTAGGAGATCTCTAAACAAATCTTCTGAGCCTGACAGTAAACATAAAAGCTACAGTGCCCCTCCTTCTCCAGTATTAAGAACTTCTTCTGCAGCTGATCTCCTAGCAGACACTATAGACGTTGATAATCCAATTCCAATAGATATGATGATTGAGGAATTTGTGGGAACAGTAGAAAATGACGAGGTAAAACAGCACGAAGTGAAGAGCATAATTGATATAGAGAATAACTTACAGTTGAGGAGAATATATGGCATTGATATTGACTGGCCTGAACGCTCATTAGATGCAATCCCCCAAATTGTTGATTCCAACTCAAAGTTGCGGAGAGTACTAAGCAGTTCAGCCAGAATTGGCTTTAATAGGACTGAAAGTACTTTGAAATATAGTGTTGGATTGAAACGTTCACACCACAGTTCTGGAAACCTGGGCTTGTTGTGCGAAGAACAGCAAGTGATACCTGAAGTAGTTGATTCTGTCTCTGATTTGTTATCAGCTGAGGATGATGATGCTTTCATTGAGACGGTGAACACCGAAGATGATTATGAACTAGGTACCATGAAATCTTGTGGAAATCCTTGGTATGTCAGGATTGTGAGCAAGCAAATGGTAGGGATATATGTATCTGTTTGGGTTCAGAGGAGATTGAGAAGGCACATTAACAATTTGAAAGTTTCCCCGGTTGGGGTTGGTCTGATGGGCTACATGGGAAACAAGGGGTCAGTTTCAATTAGTATGTCTCTCTTCCAGTCACGTTTGTGCTTTGTTTGTTCCCATTTGACTTCCGGTCAGAAGGAAGGAGCCGAACATAGGAGAAACTCTGATGTTCATGAAATTCTGAGACGCACTTGCTTCTCACCTGCCTTTGATGCAGATCAACCACAAACAATCCCATCTCACGACCAGATTTTCTGGTTCGGGGATTTGAATTATCGTATCAATATGTTGGATGCTGAGGTTAGAAAATTGGTGGCTCTAAAGAAGTGGAATGAGTTGATGAATTATGACCAGCTAAGCAAAGAATTGCGTATTGGGCATGTATTTGATGGATGGAAAGAAGGGTTGATAAACTTCCCACCCACTTACAAGTATGAAATTAACTCTGATAGATATGTTGGTCAGAGCCCAAAAGAAGGGGAAAAAAGAAGATCTCCAGCATGGTGTGATCGTATATTGTGGCTAGGAAAAGGAATAAAACAGCTACAATATGGCCGTGCAGAAATTAAGCTCTCAGATCATAGACCAGTTAGTTCAGCCTTCTTGGTTGAAGTTGAAGTATTTGACCATCGCAAGCTAAAAAGAGCTCTAAATTTCACTAGTGCAGCAGTGCACCCAGAGATCTTCCTTGATGAAGATGGAGAAATATAA 1869 0.4179 MKAKRGKRPEAFWPSIVMKKWLNIKPKVNDFSEDEVDTETESEDDACSLRGSRMREDKPSLRAQEIPSKFSSQRSDASSKGHKARHRRGKSETLRAQYINTKEVRVTIGTWNVAGRHPSEDLEIDDWLCTEDPADIYILGFQEVVPLNAGNVLGAEDNTPIQKWEAIIRRSLNKSSEPDSKHKSYSAPPSPVLRTSSAADLLADTIDVDNPIPIDMMIEEFVGTVENDEVKQHEVKSIIDIENNLQLRRIYGIDIDWPERSLDAIPQIVDSNSKLRRVLSSSARIGFNRTESTLKYSVGLKRSHHSSGNLGLLCEEQQVIPEVVDSVSDLLSAEDDDAFIETVNTEDDYELGTMKSCGNPWYVRIVSKQMVGIYVSVWVQRRLRRHINNLKVSPVGVGLMGYMGNKGSVSISMSLFQSRLCFVCSHLTSGQKEGAEHRRNSDVHEILRRTCFSPAFDADQPQTIPSHDQIFWFGDLNYRINMLDAEVRKLVALKKWNELMNYDQLSKELRIGHVFDGWKEGLINFPPTYKYEINSDRYVGQSPKEGEKRRSPAWCDRILWLGKGIKQLQYGRAEIKLSDHRPVSSAFLVEVEVFDHRKLKRALNFTSAAVHPEIFLDEDGEI* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0455 622 MobiDBLite consensus disorder prediction 28 92 - -
Vra11g0455 622 SUPERFAMILY DNase I-like 95 607 IPR036691 -
Vra11g0455 622 MobiDBLite consensus disorder prediction 43 63 - -
Vra11g0455 622 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 10 618 IPR045849 GO:0004445|GO:0046855
Vra11g0455 622 MobiDBLite consensus disorder prediction 172 192 - -
Vra11g0455 622 Gene3D Endonuclease/exonuclease/phosphatase 296 613 IPR036691 -
Vra11g0455 622 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2 10 618 - -
Vra11g0455 622 SMART i5p_5 292 595 IPR000300 GO:0016791|GO:0046856
Vra11g0455 622 Gene3D Endonuclease/exonuclease/phosphatase 85 188 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0455 Vra-Chr11 3362022 3367203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0455 362 601 Acyl Lipid Metabolism Gene Families AT2G43900 29.433 1.18e-33 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0455 K24221 - ccaj:109800886 1099.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0455 11 3362022 3367203 Vra7g1295 7 29761489 29766493 PCT