Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0432 ATGGCTGTTCAAGCTCAATACCCCTCCAATGTACTCTTTCTAAACTGCAGCAAAAGCGGAAAAGAACCACCACTTGACTATTCTTTGCCAGGGGAATTCCTTGATCATAATCAATCTTCTATGTTATTCAACAACGGAGGTAGTAATTCTCGAAAGAGAGGAAGAGAAACAGCAGCAGCTAAGGCCATTGCGCCAAACCTTGTCAATTCCTTCTCTTTACAATCACAATCACAATCTCCACACTTTGTAGACCTCACTCAACTTCATAATCAAAATGTAGTCTCCACAGGGTTGGGCTTATCCTTTGGTGATCAACAATTAAATCAGCAGCAACAGCAAAATCACGGCTGTCGCTCCTCTTCTTTCCTTTCTCTATTACCCGATGGCTTGACCTTGCAAATCAAACAACAGCACGATGAAATTGACCGATTCCTTCAAGTCCAGGGCGAGCAATTGCGGCGGGCATTGACGGAGAAGAGAAAGAGACATTATCGGGCACTGTTAAGGGCAGCGGAGGAATCGGTGTTGCGGCAGCTGAGGGAGAAGGAGACAGAGGTGGAGAAAGCCACCAGGCGCAACGCAGAGCTGGAGGCACGTGCCGCGCAGCTTGGCGTGGAGACGCAGCTTTGGCAGGCCAAAGCAAAGGCGCAGGAAGCAACTGCGGCATCATTGCAGGCACAGCTGCAGCAGGCCATGATGAGCTGTGAGGACCGCGGGGGAGGGCTGTCATGCGCCGGGGGCGAGGCAGAGGATGCCGAGTCAGCATGTGTTGACCCGGAGCGAGCTGGTCCAAAATGCAGAGGGTGTGCAAAACGGGTGGCTTCTGTGGTGGTTTTGCCGTGTCGACACCTATGCATCTGTGCTCAGTGCAACACGCATTTTCGGGCGTGTCCCGTTTGCCTCACCGTTAAAAATTCAACCGTTCAAGTCTATCTTTCTTAA 942 0.5096 MAVQAQYPSNVLFLNCSKSGKEPPLDYSLPGEFLDHNQSSMLFNNGGSNSRKRGRETAAAKAIAPNLVNSFSLQSQSQSPHFVDLTQLHNQNVVSTGLGLSFGDQQLNQQQQQNHGCRSSSFLSLLPDGLTLQIKQQHDEIDRFLQVQGEQLRRALTEKRKRHYRALLRAAEESVLRQLREKETEVEKATRRNAELEARAAQLGVETQLWQAKAKAQEATAASLQAQLQQAMMSCEDRGGGLSCAGGEAEDAESACVDPERAGPKCRGCAKRVASVVVLPCRHLCICAQCNTHFRACPVCLTVKNSTVQVYLS* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0432 313 PANTHER BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 1-LIKE 1 312 - -
Vra11g0432 313 Coils Coil 214 234 - -
Vra11g0432 313 Coils Coil 172 206 - -
Vra11g0432 313 PIRSF SBP1_RNase_bind 1 313 IPR017066 -
Vra11g0432 313 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 1 312 IPR017066 -
Vra11g0432 313 ProSiteProfiles Zinc finger RING-type profile. 266 300 IPR001841 -
Vra11g0432 313 Pfam Zinc finger, C3HC4 type (RING finger) 265 302 - -
Vra11g0432 313 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 257 313 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0432 Vra-Chr11 3133582 3135434 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0432 K19042 - gmx:100797727 426.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0432 11 3133582 3135434 Vra7g1313 7 30006117 30007813 PCT