Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0334 ATGCATCCCATTTTATCTTCAATNGAGTTGAAAAACTCTTTGCCGAGTTCTACAAGTGCACTCGTTGCTTATGATGAAGACGGCCATGTTAAAAGGACCNGAAATTTATGGAGTGCNGTGGCTCACATCATCACTGCTGTTATTGGGTCTGGCGTTCTATCTCTTGCCTGGAGCACTGCCCAGTTGGGATGGATTGGAGGGCCACTTGTAGTGCTTTTTTGTGCAATCGTCATCTACGTTTTTTCATCCCTCCTTTCTGATTGTTATAGAACTTCTGATTCTGGGAAAANAAACTACTCATACATGGATGCTGTTAGAATCAATCTTGGTAAAAGAATGACATGGTTGGCTGGTTTCCTTCAATTTTTGATCTTGTATGGGACTAGTTGTGCTTATGTACTTACTACTGGAAATAGTTTAAGAGCAATTCTGGGAGCAAATTGTTATCACAAGGAAGGGCATCAAGCTCCTTGTGCTTATGGGAGCAATATTTATATGATGATGTTTGGAAGTGTTCAAATTGTAATGTCATTCATTCCAGACCTCCATAACATGGNATGGGTCTCAGTTTTTGCAGCAGTTATGTCCTTTGCATACTCCTTAATTGGACTAGGACTTGGCTTGGCAAAGGTTATAGAAAATGGAAGAATTATGGGGAGCATAACAGGAATACCAGCTACTAACAGTGCTAACAAGTTATGGTTAGTCTTCCAAGCACTTGGTGACATTGCTTTTGCTTATCCATATGCTTTGCTCCTTCTTGAGATACAGGACACTCTGAAGTCTACTCCACCGGAAAATCAAACCATGAAAAAGGCTTCCATGGTTGCAATCATTGTGACAACATTCTTCTACCTAGCTTGTGGATGCCTTGGATATGGAGCTTTTAGAAATGGTACACCAGGGAACATCTTGACAGGGTTTGGGTTTTATGAGCCTTATTGGCTTGTTGCCTTTGCTAATGCTTGCATTATTCTTCATTATGCTAATGCTTTAATGTCACACTTGTGGTTCTAG 1017 0.4041 MHPILSSXELKNSLPSSTSALVAYDEDGHVKRTXNLWSAVAHIITAVIGSGVLSLAWSTAQLGWIGGPLVVLFCAIVIYVFSSLLSDCYRTSDSGKXNYSYMDAVRINLGKRMTWLAGFLQFLILYGTSCAYVLTTGNSLRAILGANCYHKEGHQAPCAYGSNIYMMMFGSVQIVMSFIPDLHNMXWVSVFAAVMSFAYSLIGLGLGLAKVIENGRIMGSITGIPATNSANKLWLVFQALGDIAFAYPYALLLLEIQDTLKSTPPENQTMKKASMVAIIVTTFFYLACGCLGYGAFRNGTPGNILTGFGFYEPYWLVAFANACIILHYANALMSHLWF* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0334 338 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 23 328 - -
Vra10g0334 338 Gene3D Amino acid/polyamine transporter I 29 337 - -
Vra10g0334 338 PANTHER OS05G0424000 PROTEIN-RELATED 23 328 - -
Vra10g0334 338 Pfam Transmembrane amino acid transporter protein 33 328 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0334 Vra-Chr10 8113436 8115315 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0334 25 331 Organic Solute Cotransporters AT1G77380 55.949 1.89e-122 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0334 K24917 - gmx:100816934 543.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra10g0334 10 8113436 8115315 Vra6g0103 6 735639 744449 PCT