Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0332 ATGGATGGGAAAAGCTCTCTACAAATAACTAGAAGTGGTACGGGTGATTATGATGATGATGGACATGCCAAAAGGACTGGGAATTTGAAGAGTGCTGTAGCTCATATCATTACTGCTGTTATTGGTTCTGGTGTTCTTTCTCTTGCATGGAGCACTTCTCAATTAGGGTGGATTGGAGGGCCAATTGCCCTGCTTTGTTGTGCAATTGTCACCTATATTTCTTCATTCCTTCTGTCTGATTGCTACAGAACTCCTGATCCTGTAACTGGGAAAAGAAACTACTCTTACATGGATGCAGTTAGAACTTATCTTGGTATTAAAAGAACATGGATAGCTGGCTTCCTTCAGTTTTTGACTTTATATGGGACTGGTATTGCATATGTTCTAACCACAGCAACATGTCTGGGGGCAATTCTGGCATCAAATTGTTATCACAAGAAAGGGCATCAAGCTCCTTTTCATTTTCAGGGGAACCTGTATATGGTGATGTTTGGAGTTGTTCAAATTGTAATGTCATTCATACCAGATCTCCATAACATGGAATGGGTTTCAATTGTTGCCGCACTCATGTCCTTTACATACTCATTCATTGGACTAGGACTTGGCATAGCAACAGTCATACAAAATGGAAGAATTATGGGGAGTTTGTCAGGAATACCAACTGATACAGTTGCTGACAAATTTTGGGCAGTCTTCCAAGCACTTGGTGACATTGCCTTTGCCTATCCATACTCAATTCTCCTTCTTGAGATTCAGGACACTTTAGAGTCTCCTCCACCAGAAAACCAGACCATGAAAAAGGCCTCAATGATTGCAATCTTCATTACAACATTCTTCTACCTGTGCTGTGGATGCTTTGGATATGCAGCTTTTGGAAATCAGACACCAGGAAATCTCTTGACAGGCCTTTTGAAAGGGTCTGGGTTTTATGAGCCTTTCTGGCTTGTTGACCTTGCTAATGTTTGCATCATTATTCATTTGGTTGGAGGATATCAGGTCTACAGTCAACCTATATTCAGTACTGCTGATAGATGGGCTTCAAGAAGATTCCCCAACAGTGGATTTGTGAACAATTTCTACAAAGTGAAACTGCCTTTAGTTCCTGGTTTTCAGCTAAACCTTTTCAGGTTCTGTTTTAGAACAACCTATGTGATTACAACAGTTGGTGTTGCAATCTTGTTTCCTTACTTCAACGCAATTCTAGGAGTGTTAGGAGCCATAAACTTCTGGCCATTGGCTATATACTTCCCTGTAGAGATGTACTTTGTGCAGCACAAAGTTGCAGCTTGGAGTAGAAAATGGATTGTTCTGAGAACATTCAGCTTTGCATGTTTTCTTGTGAGTGTAATGGGGTTAGTTGGATCAGTTGTTGGCATTGTAAAAGAAAAATTGAGCTGA 1398 0.4056 MDGKSSLQITRSGTGDYDDDGHAKRTGNLKSAVAHIITAVIGSGVLSLAWSTSQLGWIGGPIALLCCAIVTYISSFLLSDCYRTPDPVTGKRNYSYMDAVRTYLGIKRTWIAGFLQFLTLYGTGIAYVLTTATCLGAILASNCYHKKGHQAPFHFQGNLYMVMFGVVQIVMSFIPDLHNMEWVSIVAALMSFTYSFIGLGLGIATVIQNGRIMGSLSGIPTDTVADKFWAVFQALGDIAFAYPYSILLLEIQDTLESPPPENQTMKKASMIAIFITTFFYLCCGCFGYAAFGNQTPGNLLTGLLKGSGFYEPFWLVDLANVCIIIHLVGGYQVYSQPIFSTADRWASRRFPNSGFVNNFYKVKLPLVPGFQLNLFRFCFRTTYVITTVGVAILFPYFNAILGVLGAINFWPLAIYFPVEMYFVQHKVAAWSRKWIVLRTFSFACFLVSVMGLVGSVVGIVKEKLS* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0332 465 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 4 464 - -
Vra10g0332 465 MobiDBLite consensus disorder prediction 1 20 - -
Vra10g0332 465 PANTHER OS05G0424000 PROTEIN-RELATED 4 464 - -
Vra10g0332 465 Pfam Transmembrane amino acid transporter protein 26 460 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0332 Vra-Chr10 8065494 8069966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0332 6 447 Organic Solute Cotransporters AT1G77380 52.360 5.66e-176 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0332 K24917 - gmx:100818535 845.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0103 6 735639 744449 Vra10g0332 10 8065494 8069966 PCT