Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0271 ATGGATACACTGAACACGATCTCAACGGCACTGAACTTGGTCGATTCCAAGAAAGAGAATCTAAAGAAAGCCTTCGATGATCTTCAATCCCTTCTCTCTCCTCTTCCTTTTGCATGGTCAGACCTCGATTCTCACTTCACCTCGCTCCACCACACTCTCTCCCACCGCCTCCACCTCCTCCAATCCCAAACCCTAACCCTAACCACAACCCCAATTCCCGACCCACCTGCTCAAACCCCTAATGAAGCAAACTTTTCATCAAACCCTAAAAACCCATCATCCAATCATGACGAATCTTCACCTGGGGTGTCCCCCCAAAACGACGACGTTCCAGGCCCGGTTGCGCCTGGAAACGAGTTGGTCGTTCTTTGCGAGAAAATGGACGGCGTGGGGTTGAGAAATTACGTCAATGACAATTTTTTGGACATGGCCAGGGTTCAGGTGGAGCTTCCCGGTGCGTTTCGCCATGCGCCGGACGCGGGTGTGATGGTTCTGGATGCGTTGGAGGGGTTTCATGGAGATGGTAGCCGATCGAAGAACTGGGAATTGAGGAATATGAGGAAGAGTTGTGTTGTGCTGTTGAGGCAATTCAGGGTTGCCGCTCTAAGTGTGAGTGCTGAGGCCAGTTTGAGAGCTGTGAAGTTGGCCCAGGCATGGAAGGAGAAGTTGGTGGGCGATGATAACAACGCGTGTGAAGCTTTGGGGCTTTTGCATTTGATTGCTGCATTTGGTTTGGTGTCTGAATTCAGCTGGGATGAGCTTGTTGACTTTTCGGTCCTGGCCCCCGTCAATGAAGAGTTCCCAGAGCTGTGCCGGGCTGTCGGGTTGACAGAGAAAGTTCCTGATATTGTTCAGAAACTTATAGATAAGGACAAACACATCCCTGCTGTCAAGTATATTCTTGAGTTTAATCTTGCTGACAAGATTCCACCTGTTCCGGTTTTGGAAGCTGCTGTGGATGAGGCTAAGAAACTTGGTAGAAAACTTTCCGAAGAAGGAAATTCATCTAGTGAGAGTACTGCTAGAGAAATTCATACACTGAAATTGGTGATCAAGATTATTGAGAATTATAAGCTTGAAACTGAACACCTACGAGCCAGCGTTGAGCAGCGTATAGAGCAATTAAAGAAGCAGAAGACAAATAATAAACGATCTACTCCATCACCTGCTTCAAAACCTCAACATAAGCAGCAGCAACAACAGCAAAAGAGGAATATGCAAAAGCAGCAGCAGACTTGGATTAAGCATCCTCGAGCATCTGCTCCAGTTGTTGCTACAGCTGTCCTCAAGAATGCCAATTCAGCAATGCACCACTACCAGCAAACTCGTGTCCATCCATCAGGTTTGTTTCCAGAGCATCCAAATCCCTATAGGAGCTCGCCAGCCATGCCATTTGGCATGATGGTTTCTACCCCAAAATATCTTCCATATGCAGGTCCTTCAGCCAGATCTTATTATGGCCATGATGGTGTCCCAATGGGTCCCCGTGGCAACCCCAATCTAAGTGGTTCTCATCTAAGTTCATCAGAGCCACATGTGCCAACTGGTGGTTATTATGATAGAACCTCAACCTTTGGTGGTAGTGGTCTGCAACATCATTACCAAGCATCTTATTACCCTCAATAG 1626 0.4748 MDTLNTISTALNLVDSKKENLKKAFDDLQSLLSPLPFAWSDLDSHFTSLHHTLSHRLHLLQSQTLTLTTTPIPDPPAQTPNEANFSSNPKNPSSNHDESSPGVSPQNDDVPGPVAPGNELVVLCEKMDGVGLRNYVNDNFLDMARVQVELPGAFRHAPDAGVMVLDALEGFHGDGSRSKNWELRNMRKSCVVLLRQFRVAALSVSAEASLRAVKLAQAWKEKLVGDDNNACEALGLLHLIAAFGLVSEFSWDELVDFSVLAPVNEEFPELCRAVGLTEKVPDIVQKLIDKDKHIPAVKYILEFNLADKIPPVPVLEAAVDEAKKLGRKLSEEGNSSSESTAREIHTLKLVIKIIENYKLETEHLRASVEQRIEQLKKQKTNNKRSTPSPASKPQHKQQQQQQKRNMQKQQQTWIKHPRASAPVVATAVLKNANSAMHHYQQTRVHPSGLFPEHPNPYRSSPAMPFGMMVSTPKYLPYAGPSARSYYGHDGVPMGPRGNPNLSGSHLSSSEPHVPTGGYYDRTSTFGGSGLQHHYQASYYPQ* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0271 541 Coils Coil 358 385 - -
Vra10g0271 541 MobiDBLite consensus disorder prediction 376 419 - -
Vra10g0271 541 MobiDBLite consensus disorder prediction 381 416 - -
Vra10g0271 541 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 1 540 - -
Vra10g0271 541 Pfam Frigida-like protein 117 386 IPR012474 -
Vra10g0271 541 PANTHER FRIGIDA-LIKE PROTEIN 1 540 - -
Vra10g0271 541 MobiDBLite consensus disorder prediction 67 116 - -
Vra10g0271 541 MobiDBLite consensus disorder prediction 79 106 - -
Vra10g0271 541 MobiDBLite consensus disorder prediction 489 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0271 Vra-Chr10 7162592 7166767 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0271 - - gmx:102669439 751.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra10g0271 10 7162592 7166767 Vra6g0163 6 1188096 1190977 PCT