Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0249 ATGCGGCACTTCATGGCTCTCTCTAGTGTACTTGCTATACTCATTCTGCAGTACTCATTGGTAGCACTGGTTTCTTCAGCAGGACCACCAAGTGGCTGGAAAACATTGCGTGGATCTCCACCAGTGGTCATAGCACGTGGAGGGTTTTCAGGGATATTTCCAGATTCAAGTTCACTTGCCTATAATTTGGCACTTAACACTAGTAACCCAGATGTGATTCTATGGTGTGATGTGCAATTAACAAAGGATGGCAAAGGGATTTGTTTCCCAGAGCTAAAGCTGGACAATGCCACTGATATTTCAGTTGTTTACCAAGACAAGCAAAAGGATTACTTTGTTAATGGGGTCTCATCCCGGGGATGGTTTTCTGTAGACTACAACTTCAAAGAACTAGCAAATGTTTCTCTTGTTCAGGGAGTTTACTCTCGGACTCCTAAGTTCGATGGCAACAAGCTTCCCATTCTCCATGTTCACGAAGTAGCTAAGTTGATAAAATCTCCATCTACAGGCCTGTGGTTAAATATTCAGCATGATTCGTTCTTCAAGCAACAAAATTTGAGTGTAGAAAAATTTCTACGGTCTCTCATTGCTAAAAATGTAACTGTCAGTTACATTTCATCACCTGATGTGGATTTCTTAAAAAGAGTTAAATCAAGATTTAGTCCTGGAACAACCAGCTTGATCTTCAGGGTTCTAGAGCAGTCTGAGATTGAACCTACAACCAATCAATCTTATGGTGAACTCCTGAAAAATCTTAAACAAATAAAGAAATTTGCTTCAGGAATTCTTGTTCCCAAGGGCTATATATGGCCTGTAGACTCAAACCTTTATCTGCAACCACATACCTCTCTTGTCTCAGATGCTCACAAAAAAAAGTTGCAAGTTTTTGTATCAGACCTTATCAATGATGTTCCATTTAGCTACAATTTCAGTTATGATCCTGTGGCTGAGTGTCTATCATTCTTTAATGTTAGTGATTTCTCTGTTGATGGTGTGTTGTCTGACTTCCCAGTTACTCCATCTGCAGCCATAAATTGCTTTTCTGGCCTAGGGGAAAATCCCACTAAACAAGTGGACACTTTGGTTATCACAAAATATGGAGCAAGTGGAGATACTCCTGCTTGTACTGACCTTGCATATAACAAAGCTAAATCAGACGGGGCAGATGTACTTGACTGTCCTGTTCAAATGTCCAAGGATGGAACACCCTTTTGCTTAAGCTCTGTAGACCTTTTAGAGAGCACAACGGTTGCTCATACAAACTTCAAAACCCGTGCTACAACTATTCAGGAGATCAAAAACACCAGTGGCATATATACATTCAGCTTAACATGGGAGGAGATAAAAACATTGACTCCCTCAATATTGAAACCTTACGAGAAATTCAGACTGTTCCGAAATCCAAAATTGCAAAATCAAGGAAAGCTGATAACCTTGTCTGAGTTTTTGTCCTTGACTGAAGGCTCTCGCATCTTGATCGGCATAGAGAATGCTGCATATCTGGCAGAGAAGCAGAATTTAAGTGTGATCAATGCAGTCCTTGATGCTCTAAAGAAAACAAAACGAAGATCACACAAAGTTATGATTCAGTCAACTCATAGCTCTGTGCTTAAAATATTAGATAAATCGAAATTTGAAAGGGTTTACAAGGTTGATGAGAACATTGGCGATGCTTCTGAAACGGCTATTAAGGACATCAAAACATTTGCTGATTCTGTGGTAATAGGAAAGAAGTCTGTTTTTCCTGAAACTGAAGCCTTTTTAGTTAACGCTACAAACATTGTGGCAAAGCTGAAGTCAGCTAAGCTCCGAGTTTATGTAGAAACATGCAGCAATGAATTTGTATCTCAAGCATGGGACTACTACTCTGATGCATCTATTGAGATAAATTCATTTGTCATGGGAGCCAAGGTGAATGGCATCATTACTGACTTCCCCAAGACAGCTGACAGATACAGGAGGAACTTGTGCTTAAAGCATGGCAAAAAAGCACCTTACATGAGCCCTATTGAACCTGGCAAACTTTATCGACAGATTTCTGAGTTGTTCCTTCCACCACTTCCTCCTCCATCCCCTGTCTTGATCGATAGTAATGTGACAGAGGCACCTTTGCCCAGAGTTCCAACTGCATAG 2133 0.4041 MRHFMALSSVLAILILQYSLVALVSSAGPPSGWKTLRGSPPVVIARGGFSGIFPDSSSLAYNLALNTSNPDVILWCDVQLTKDGKGICFPELKLDNATDISVVYQDKQKDYFVNGVSSRGWFSVDYNFKELANVSLVQGVYSRTPKFDGNKLPILHVHEVAKLIKSPSTGLWLNIQHDSFFKQQNLSVEKFLRSLIAKNVTVSYISSPDVDFLKRVKSRFSPGTTSLIFRVLEQSEIEPTTNQSYGELLKNLKQIKKFASGILVPKGYIWPVDSNLYLQPHTSLVSDAHKKKLQVFVSDLINDVPFSYNFSYDPVAECLSFFNVSDFSVDGVLSDFPVTPSAAINCFSGLGENPTKQVDTLVITKYGASGDTPACTDLAYNKAKSDGADVLDCPVQMSKDGTPFCLSSVDLLESTTVAHTNFKTRATTIQEIKNTSGIYTFSLTWEEIKTLTPSILKPYEKFRLFRNPKLQNQGKLITLSEFLSLTEGSRILIGIENAAYLAEKQNLSVINAVLDALKKTKRRSHKVMIQSTHSSVLKILDKSKFERVYKVDENIGDASETAIKDIKTFADSVVIGKKSVFPETEAFLVNATNIVAKLKSAKLRVYVETCSNEFVSQAWDYYSDASIEINSFVMGAKVNGIITDFPKTADRYRRNLCLKHGKKAPYMSPIEPGKLYRQISELFLPPLPPPSPVLIDSNVTEAPLPRVPTA* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0249 710 Pfam Glycerophosphoryl diester phosphodiesterase family 367 648 IPR030395 GO:0006629|GO:0008081
Vra10g0249 710 ProSiteProfiles GP-PDE domain profile. 360 653 IPR030395 GO:0006629|GO:0008081
Vra10g0249 710 SUPERFAMILY PLC-like phosphodiesterases 40 343 IPR017946 GO:0006629|GO:0008081
Vra10g0249 710 Gene3D Phosphatidylinositol (PI) phosphodiesterase 40 343 IPR017946 GO:0006629|GO:0008081
Vra10g0249 710 Gene3D Phosphatidylinositol (PI) phosphodiesterase 359 652 IPR017946 GO:0006629|GO:0008081
Vra10g0249 710 CDD GDPD_SHV3_repeat_1 41 343 - -
Vra10g0249 710 SUPERFAMILY PLC-like phosphodiesterases 361 653 IPR017946 GO:0006629|GO:0008081
Vra10g0249 710 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE FAMILY PROTEIN 5 707 - -
Vra10g0249 710 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 5 707 - -
Vra10g0249 710 ProSiteProfiles GP-PDE domain profile. 41 344 IPR030395 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0249 Vra-Chr10 6802972 6807780 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0249 1 707 Receptor kinase-like Gene Family AT4G26690 55.014 0.0 788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0249 - - gmx:100813869 1137.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0173 6 1263563 1264599 Vra10g0249 10 6802972 6807780 PCT