Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0231 ATGGCGGCTATGGATGGTCAAAATCCTCTCCTTGATGAAATCACCTGCGGTTCCTTGTTACATAAGCTTCAGGAAATATGGGATGAGGTTGGTGAGAGTGATGAGGAGCGAGACAAGATGCTCCTTCAGATAGCGGAAGAGTGCTTGGATGTGTACAAAAGAAAGGTTGAGATGGCTGCTAAGTCAAGGGCACGGTTACTTCAATCCTTGTCTGATGCTAAGCTTGAACTGTCAAGTCTTTTATTGGCTCTTGGTGAAAACAGTTTCACTGGAAGGCCTGACAAGACTTCAGGTACTATTAAGGAACAACTTGCAGCCATAGCACCAATACTTGAACAGCTTTGGCAACAAAAAGAGGAAAGAGTAAAGGATTTTTCAGATGTACAGTTACAGATCGAACAAATATGTGGAGAGATAACTGGGGACTCGAACCCTGATCAGACTGGATCAGGATCATTTTCTATTGATGATTCTGACCTTTCCTTGAAGAAGTTGGATGAATATCAATCCCAACTCCAAGAACTTCAAAGGGAAAAGAGCGAGAGGTTGCACAAGGTTCTTGAATATGTGAGTACAGTGCATGATCTATGTGCTGTCCTTGGCATGGACTTCTTTAGTATTGTGACTGAAGTTCATCCAAGCTTAAATGATGCTGTAGGTGTTCATTCCAAAAGCATAAGCAATGGCACACTAGCTAAACTGGCTAACACAGTCTCTGCCCTGAAAGAAGATAAAAAGCAGCGGCTACACAAGCTTCAAGAATTAGCTTCTCAGTTGATTGATCTGTGGAATCTAATGGATACCCCAACAGAGGAAAGGAGACTATTTGACCATGTTACTTGTAATATCTCAGCTTCTGTAGATGAAGTCACTGTTCCTGGTGCCCTTGCTCTGGATTTGATTGAGCAGGCTGAAGTGGAAGTTGAAAGGCTTGATCAGCTGAAAGCCAGCAAGATGAAAGAAATTGCTTTCAAGAAGCAAGACGAGCTTGAAGAGATATATGCCCGTGCTCATGTAGAAATAAACCCTGAAGCTGCTCGAGGGAATATTTTGTCATTGATTGACTCTGGAAACATTGAACCATCTGAATTACTGACTGATATGGATAAACAGATAGCTGCAGCAAAAGAAGAAGCTTTAAGCAGAAAAGAAATATTGGACAAGGTTGAGAAATGGATGTCTGCATGTGAAGAAGAGAGCTGGCTTGAAGACTATAATAGGGATGAAAACAGGTATAATGCTAGTAGAGGTGCACACATAAACCTCAAACGTGCTGAGAAAGCTCGAATTCTGGTCAGCAAAATTCCAGCTTTGGTTGATACATTGGTTGCTAAAACTCGCACTTGGGAAGAAGTACACAACATGTCATTCACATATGATGGTGTTCCTCTCCTTGCTATGCTGGATGAATATGCCATGCTGAGGCATGAACGACAAGAGGAAAAACGAAGGATGAGGGACCAGAAAAAGTACTATGAACAGCAAACCACAGATCAGGAATCTGTGTTTGGTTCAAGACCTAGTCCTGCAAGGCCACTTGGCAACAAGAAGGTAGTTGGCCCTCGACCAAACGGTACTCCAAATAGACGGTTATCTCTTAATGCTCATCAAAATGGAAGCAGGTCCACAGCAAAAGATAGAAAAAGGGATAATACTAGACCAGTTGCTCCCCTTAACTATGTATCAATGTCAAAAGAAGATGCTGCTTCCCATGTTTCTGGTACTGAACCAGTCCCAACATCACCCTAG 1749 0.4242 MAAMDGQNPLLDEITCGSLLHKLQEIWDEVGESDEERDKMLLQIAEECLDVYKRKVEMAAKSRARLLQSLSDAKLELSSLLLALGENSFTGRPDKTSGTIKEQLAAIAPILEQLWQQKEERVKDFSDVQLQIEQICGEITGDSNPDQTGSGSFSIDDSDLSLKKLDEYQSQLQELQREKSERLHKVLEYVSTVHDLCAVLGMDFFSIVTEVHPSLNDAVGVHSKSISNGTLAKLANTVSALKEDKKQRLHKLQELASQLIDLWNLMDTPTEERRLFDHVTCNISASVDEVTVPGALALDLIEQAEVEVERLDQLKASKMKEIAFKKQDELEEIYARAHVEINPEAARGNILSLIDSGNIEPSELLTDMDKQIAAAKEEALSRKEILDKVEKWMSACEEESWLEDYNRDENRYNASRGAHINLKRAEKARILVSKIPALVDTLVAKTRTWEEVHNMSFTYDGVPLLAMLDEYAMLRHERQEEKRRMRDQKKYYEQQTTDQESVFGSRPSPARPLGNKKVVGPRPNGTPNRRLSLNAHQNGSRSTAKDRKRDNTRPVAPLNYVSMSKEDAASHVSGTEPVPTSP* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0231 582 Coils Coil 242 262 - -
Vra10g0231 582 Pfam Microtubule associated protein (MAP65/ASE1 family) 18 509 - -
Vra10g0231 582 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 4 582 IPR007145 GO:0000226|GO:0008017
Vra10g0231 582 Gene3D - 372 505 - -
Vra10g0231 582 PANTHER MICROTUBULE-ASSOCIATED PROTEIN, MAP65/ASE1/PRC1-RELATED 4 582 - -
Vra10g0231 582 MobiDBLite consensus disorder prediction 479 582 - -
Vra10g0231 582 Coils Coil 301 321 - -
Vra10g0231 582 Coils Coil 158 185 - -
Vra10g0231 582 MobiDBLite consensus disorder prediction 566 582 - -
Vra10g0231 582 MobiDBLite consensus disorder prediction 479 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0231 Vra-Chr10 6609364 6615865 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0231 13 547 EF-hand Containing Proteins AT5G62250 43.590 5.36e-127 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0231 K16732 - zju:107403625 918.302
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra10g0231 10 6609364 6615865 Vra6g0191 6 1398993 1403744 PCT