Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0184 ATGCTCATTCCTACTACTTCTCTACTTCATCTTCTTTTTTCTCTCTCATTTCCCAAAGCCATGATGAACAAGTTCAAGAAATCTCAAGTTCTAGTGCTGTGTGTTCTACTTGTTCTTCTTGTGATCACACCCTATTTACCTTCCTCACTCAGACCAACCTACTTGTATTTCATCATAAACTTCCTGATCATGTCACTTTGTGCTGAAGCTGGACTCCTTTCAGTTTTTCCCAGGCCTTTGGAAGATAAAAAGCAACCTGCTTCTGTGATGGCATCAGAAGCAAGTTCTGAGAAAAGAGTCTCAAAAGATGATGAAAAGTCAGGAGGATCTGAAGGCAGGAAAGTGGAGATGATGCAAAAGGGTAGCCTTTTGTTGATAGAAGGTGAAGATGAAGAAGTGATGATGGATGAAGAAGATGAAGCAGAAGAGGAGATTGGAGGAGTTAATGGGCAAGAGCTGTTTGCAAAAGCTGAGGCCTTCATTGGAAACTTCTACAAGCAACTGAAAATGTAG 513 0.4094 MLIPTTSLLHLLFSLSFPKAMMNKFKKSQVLVLCVLLVLLVITPYLPSSLRPTYLYFIINFLIMSLCAEAGLLSVFPRPLEDKKQPASVMASEASSEKRVSKDDEKSGGSEGRKVEMMQKGSLLLIEGEDEEVMMDEEDEAEEEIGGVNGQELFAKAEAFIGNFYKQLKM* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0184 170 MobiDBLite consensus disorder prediction 96 113 - -
Vra10g0184 170 PANTHER OS01G0532300 PROTEIN 116 170 - -
Vra10g0184 170 PANTHER OS01G0532300 PROTEIN 22 107 - -
Vra10g0184 170 MobiDBLite consensus disorder prediction 82 113 - -
Vra10g0184 170 Pfam Cotton fibre expressed protein 151 170 IPR008480 -
Vra10g0184 170 PANTHER OS01G0532300 PROTEIN 22 107 - -
Vra10g0184 170 PANTHER OS01G0532300 PROTEIN 116 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0184 Vra-Chr10 5116694 5117450 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0184 - - vra:106780159 275.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra10g0184 10 5116694 5117450 Vra6g0226 6 1689816 1690575 PCT