Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04650 ATGAATACTAGGAAACAACAGATTGATGAGATAAGAAGTCTGAGATTAATAACTGCTGTGAAAACTCCATACCTACCAAACGGCGATATCGATCTCGAAGCATATGATAACTTGGTGAAGATACAAATTGAAAATGGTGTTGAAGGAATTCTTGTTGCTGGAACAACTGGTGAAGGGCAGTTAATGAGCATAAATGATAAAGTAATGCTAATTGCTCACACTGTCAACTCTTTTGGTGATAAAGTAAAAGTCATTGGTAATGCAGGAAGCAACTCAACATCACAGGCAATTACTATAACTGAGCATGGTTTTGCAGTTGGAATGGATGCTGCACTTCATATAAACCCTTACTATGGAAAAACCTCAATGGAAGGTTTGGTTGAACATTATAATAGTGTGCTTTCTATAGGACCTGTTATTATATACAACATACCTTCAAGAACTGCTCAGGATATTCCTCCTAGTGTGGTTGAAGTTTTGGCTCAAAACCCTAATTTTGTTGGTGTGAAAGAGTGTGTGGGAAATGAGAGGGTGAAGATGTATACTGATAAAGGGATTGTTGTGTGGACTGCAAATGATGAGGAAAGTCATGAAGATAGATGGGAATATGGTGCTGTTGGGAACATGTCTGTTGCAAGTAATTTGATTCCTGGTTTGATGGTGAAACTTATGGTTGATGGAAAGAATCATTTGTTGAATTCAAAGGTTATGCCTTTGTTTGATTGGCTTTGTTTAGAGCCATGTCCTATTGCTTTGAACACTGCTCTTGCTCAACTTGGTGTTGTTAAGCCTGTTTTTAGGCTACCAAGTGTGCCTTTGAGTAGGGAGAGAAGGGTTGAGTTTGTCAAATTGGTGAAGGAAATTGGAAGAGAGAATTTTGTTGGAGAAAAGGATGTTGAAGTTCTTGATGACAAGGATTTTATCTTGGTTGGTCGTTATTAG 942 0.38 MNTRKQQIDEIRSLRLITAVKTPYLPNGDIDLEAYDNLVKIQIENGVEGILVAGTTGEGQLMSINDKVMLIAHTVNSFGDKVKVIGNAGSNSTSQAITITEHGFAVGMDAALHINPYYGKTSMEGLVEHYNSVLSIGPVIIYNIPSRTAQDIPPSVVEVLAQNPNFVGVKECVGNERVKMYTDKGIVVWTANDEESHEDRWEYGAVGNMSVASNLIPGLMVKLMVDGKNHLLNSKVMPLFDWLCLEPCPIALNTALAQLGVVKPVFRLPSVPLSRERRVEFVKLVKEIGRENFVGEKDVEVLDDKDFILVGRY 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04650 313 PIRSF DHDPS 8 300 IPR002220 GO:0016829
Vivi7g04650 313 SUPERFAMILY Aldolase 16 289 - -
Vivi7g04650 313 PRINTS Dihydrodipicolinate synthase signature 82 100 IPR002220 GO:0016829
Vivi7g04650 313 PRINTS Dihydrodipicolinate synthase signature 137 154 IPR002220 GO:0016829
Vivi7g04650 313 PRINTS Dihydrodipicolinate synthase signature 114 130 IPR002220 GO:0016829
Vivi7g04650 313 PRINTS Dihydrodipicolinate synthase signature 46 67 IPR002220 GO:0016829
Vivi7g04650 313 SMART DHDPS_2 13 289 IPR002220 GO:0016829
Vivi7g04650 313 CDD DHDPS 15 285 IPR005263 GO:0008840|GO:0009089
Vivi7g04650 313 ProSitePatterns Dihydrodipicolinate synthase signature 2. 142 172 IPR020625 GO:0016829
Vivi7g04650 313 PANTHER DIHYDRODIPICOLINATE SYNTHASE 9 298 IPR002220 GO:0016829
Vivi7g04650 313 Pfam Dihydrodipicolinate synthetase family 14 287 IPR002220 GO:0016829
Vivi7g04650 313 Gene3D Aldolase class I 7 313 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04650 Vivi-Chr7 118274344 118275682 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04650 K01714 - gmx:100806626 485.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04650 7 118274344 118275682 Vivi7g04650 7 118274344 118275682 ECH
Vivi7g04650 7 118274344 118275682 Vivi7g04646 7 118261488 118263949 PCT