Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04646 ATGAGCACCACAGGGGTGAGAAAAAGGGCCACAATGGAAGAATTGAGGAGTCTGAGAATGGTAACGGCAGTCAAGACTCCATACTTAGCCAATGGCCGAATCGATCTCGATACATATGATAACTTGGTGAACATGCAAATTGCAAAAGGTGTTGACGGTATCCTTGTTGCTGGAACAACTGGTGAAGGCTCTTTAATGACCTGGGACGAACAAATAATGCTTATAGCCCACACAGTCAAGTCTTTTGGCGACAAAGTCAAGGTTATCGGCAACGGTGGAAGCAACTGCACATCAGAAGCAATTACTGCCACCGAGCGAGGTTTTGCTGTTGGAATGGATGCTGCAATGCATATAAACCCTTACTATGGAAAAACCTCATCAGAGGGTTTGATTGCTCACTATAATTGTGTGCTTTCAATCGGGCCGGTGATCATATACAACGTACCAGCTAGGACTAATCATGATATTCCTCCTAGTGTAGTTGAAAAATTGGCTGAACATCCTAACTTGATTGGCATCAAAGAATGTATAGGAAACGACAGAGTGAAAATGTATACGAGCAAGGGACTTCATGTTTGGACCGGAACCGATAGAGAAAGCCATGATGCTAGATGGGAATGTGGTGCTGCTGGACTTTATTCGGTTGCTGGAAACTTGATTCCTGGTTGGATGAAGGAACTCGTGGTTGAGGGTAAGAATCCTTCATTGAATGCGAAGTTGGCGCCTTTGTTCGATTGGATATTTCATGTGCCGACGCCGGTTGCTTTGAACACTGCGCTTGCTCAACTTGGAGTTATTAAACCAGTTTTCAGGCTACCACATGTTCCTGTTCCTATTGAGAAGAGGAGAGAGTTTGTGAATTTGGTGAAGGAATTTGGTAGAGAGAATTTTGTTGGTGAAAAAGATGTTCAAGTTCTTGATGATGAAGACTTTATTATTGTTGCTCGTTACTAA 954 0.4319 MSTTGVRKRATMEELRSLRMVTAVKTPYLANGRIDLDTYDNLVNMQIAKGVDGILVAGTTGEGSLMTWDEQIMLIAHTVKSFGDKVKVIGNGGSNCTSEAITATERGFAVGMDAAMHINPYYGKTSSEGLIAHYNCVLSIGPVIIYNVPARTNHDIPPSVVEKLAEHPNLIGIKECIGNDRVKMYTSKGLHVWTGTDRESHDARWECGAAGLYSVAGNLIPGWMKELVVEGKNPSLNAKLAPLFDWIFHVPTPVALNTALAQLGVIKPVFRLPHVPVPIEKRREFVNLVKEFGRENFVGEKDVQVLDDEDFIIVARY 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04646 317 ProSitePatterns Dihydrodipicolinate synthase signature 2. 146 176 IPR020625 GO:0016829
Vivi7g04646 317 ProSitePatterns Dihydrodipicolinate synthase signature 1. 53 70 IPR020624 GO:0016829
Vivi7g04646 317 Gene3D Aldolase class I 11 317 IPR013785 -
Vivi7g04646 317 PANTHER DIHYDRODIPICOLINATE SYNTHASE 12 302 IPR002220 GO:0016829
Vivi7g04646 317 Pfam Dihydrodipicolinate synthetase family 18 291 IPR002220 GO:0016829
Vivi7g04646 317 PRINTS Dihydrodipicolinate synthase signature 141 158 IPR002220 GO:0016829
Vivi7g04646 317 PRINTS Dihydrodipicolinate synthase signature 86 104 IPR002220 GO:0016829
Vivi7g04646 317 PRINTS Dihydrodipicolinate synthase signature 118 134 IPR002220 GO:0016829
Vivi7g04646 317 PRINTS Dihydrodipicolinate synthase signature 50 71 IPR002220 GO:0016829
Vivi7g04646 317 CDD DHDPS 22 289 IPR005263 GO:0008840|GO:0009089
Vivi7g04646 317 SMART DHDPS_2 17 293 IPR002220 GO:0016829
Vivi7g04646 317 PIRSF DHDPS 12 304 IPR002220 GO:0016829
Vivi7g04646 317 SUPERFAMILY Aldolase 21 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04646 Vivi-Chr7 118261488 118263949 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04646 K01714 - gmx:100806626 490.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04650 7 118274344 118275682 Vivi7g04646 7 118261488 118263949 PCT