Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04491 ATGGGAAGAACTGCAAAAAGCTGCAATCGCAGTTGCAATGCTGCTGTCGAGACTGCTAAAAGCTTTCTATGCGACCAAAAGTCCAAAACTGCAGATGCGGGCTGCAATTTAAGACCAAAATTTTTGCATGAGTTTGTTAGGTATGCAGTGGTGACAGGCTCAAACAAAGGAATTGGGTTAGAAATAGTTAGGCAGTTAGCTTCAGCTGGTATCAAGGTGGTGCTTACAGCAAGAGATGAGAAAAGAGGTCTTCAAGCTTTGGAAACACTCAAAGCATCTGGTTTATCTGATTTTGTTGTTTTTCATCAACTAGATGTGGCTGATGCTTCAAGTGTAGCCTCTCTTGCAGACTTTGTCAAATCACAATTTGGCAAACTTGATATTCTGGTGAACAATGCAGGTATTATTGGAACTATAATTAATGACAAAGAGTTATTTAATCTCGCTATCATCAACCGTGGGGCATTATCAGCAGATAATAGGAAAAAGGCATTGACTCAAACATACGAATTAGCCGAAGAATGCTTGAAAACAAACTATTATGGAGCTAAAATAACTGTTGAATCACTTCTTCCCCTTCTTCAGTTATCCGATTCACCGAAAATTGTTAATATATCATCCACTTTGGGGCAATTAGAGGATCTTACAGTTTATTCATGTCAATTCCAGAGTATACCGAATGGAAGTGCAAAAAGTATCTTCAGTGATGCTGATAATCTAACAGAAGAGAAAGTGGAGAAAGTATTAAAGAAATTTCTGAAAGATTTCAAAGAAAGTTCATTAGATAATGAAGATAATGGCTGGCCTAAGACTTTAGGTGCCTATATCATTTCTAAAGCTGCTATGAATGCTTATACAAGAATTGTAGCTAAGAATTGTCCTGCTCTATGCATCAATAGTGTTTGCCCGGGTTATATCGTAACAGATATAACTGCCAATACCGGTTTGTTAACTGTTGAAGAAGGCGCTGCTAGTGTTGTAAGGCTAGCACTACTTCCTAATGATAGTCCTTCCGGCTTCTTCTTTTATCAGAGTGAAGTGTCCTCCTTTTGA 1053 0.3818 MGRTAKSCNRSCNAAVETAKSFLCDQKSKTADAGCNLRPKFLHEFVRYAVVTGSNKGIGLEIVRQLASAGIKVVLTARDEKRGLQALETLKASGLSDFVVFHQLDVADASSVASLADFVKSQFGKLDILVNNAGIIGTIINDKELFNLAIINRGALSADNRKKALTQTYELAEECLKTNYYGAKITVESLLPLLQLSDSPKIVNISSTLGQLEDLTVYSCQFQSIPNGSAKSIFSDADNLTEEKVEKVLKKFLKDFKESSLDNEDNGWPKTLGAYIISKAAMNAYTRIVAKNCPALCINSVCPGYIVTDITANTGLLTVEEGAASVVRLALLPNDSPSGFFFYQSEVSSF 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04491 350 PRINTS Glucose/ribitol dehydrogenase family signature 48 65 IPR002347 -
Vivi7g04491 350 PRINTS Glucose/ribitol dehydrogenase family signature 275 294 IPR002347 -
Vivi7g04491 350 PRINTS Glucose/ribitol dehydrogenase family signature 124 135 IPR002347 -
Vivi7g04491 350 PRINTS Glucose/ribitol dehydrogenase family signature 294 311 IPR002347 -
Vivi7g04491 350 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 124 135 IPR002347 -
Vivi7g04491 350 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 200 208 IPR002347 -
Vivi7g04491 350 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 275 294 IPR002347 -
Vivi7g04491 350 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 47 348 - -
Vivi7g04491 350 Gene3D - 46 350 - -
Vivi7g04491 350 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 47 336 IPR036291 -
Vivi7g04491 350 CDD carb_red_PTCR-like_SDR_c 47 350 IPR045313 GO:0016616
Vivi7g04491 350 Pfam short chain dehydrogenase 48 219 IPR002347 -
Vivi7g04491 350 FunFam (+)-neomenthol dehydrogenase 43 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04491 Vivi-Chr7 115465540 115467491 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04491 49 134 Miscellaneous Gene Families AT2G29150 41.379 1.90e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04491 K15095 - gmx:102663482 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04491 7 115465540 115467491 Vivi7g04491 7 115465540 115467491 ECH
Vivi7g04491 7 115465540 115467491 Vivi7g04494 7 115474538 115476124 PCT
Vivi7g04496 7 115583442 115585026 Vivi7g04491 7 115465540 115467491 PCT