Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03967 ATGAATTTGCAACAAGTTGGGCAGCCTAAATCTTCTAATGGATATGGTCGTCGGAAATCTGAAAAAGATGGGGCATCCAAATCGGATAATAAGATTCCCCCTGGAAAATCAAATGCTGGCAGATTAGCGAGTACAGGTGCAGTGACAAGTAGTAAAGGTGGTAGTTATGAGAGTCCTTCACGTGATCGACTGGTATATTTAACAACATGCCTTATTGGGCAACAGGTGGAAGTCCAGGTGAAAAATGGATCTATATACTCTGGAATATTTCATGCTACAAATTCTGAGAAGGATTTTGGTATCATCTTGAAAATGGCTTGCTTGACAAAGGATGGGTCTTCGCAAGGGCCGAGCTCCGGTGCGGAATTTGTCAGCAAAGCTCCTTCTAAAACTTTAATTATACCTGGAAAAGAACTTGTACAAGTTATAGCAAAGGATGTTGCTGTTTCTACAGGTGACCTAGCCAGTGAATCTCACTATGATGTGCATCAGGAGATCATGGTTGATTCGGTAATATCTCAACCTCGTCATGTTGATTTGGGGAGAGAATTACACCGATGGGTGCCTGATGAAAATGTTCCACAATGCCCTGAACTTGACAATATCTTTGATGGCTCTTGGAATAGCTCTAGGGGCTGGGATCAGTTTGAAACAAATAAAATGTTGTTTGGAGTAAAAAGCACATTTGACGAGGAACTCTATACTACAAAGCTTGAAAAAGGGCCTCGGATGAGAGAATTAGAGTTGCAAGCACTAAGAATAGCAAGAGAAATTGAGGGCGAGGAAACCCAAGATATTCATCTAGCAGAGGAAAGAGGTCTTTACCCTGATGACTTTGATATTGATGAAGAGACCAGATTCTCTTCCGTATATAGGGGTAAAGGTGTTGACGATGAATATGACGAGAATGAAGACAATTTTTTGGATTCACAAAATTCCGAAACGTTTGGTGATATTTCCGATTCAGTCATTAAGAGACCAGGAAAGTCATCTCAGTCAAAAACTGGTGGAGATGGTTCTTATGATCATGCTAAGCAGTTATCATCTGAAGTCTCTGGTCAAAGTTACTCATTTTCAGATGTGGAAAGCAGGATTCAGGATAACTCTGTTTGTGATCTAATTGGAGCCAATGGTAACACCAAGGAAGAAAATCAGACGCAAGCTGAGGATGTACAGCTGTCAAAATATCAGGATTTGAAACCTGCACCTAACTTGAAGAAAGACGGATCTGATAAAGTGGGATTAACTCCTACTAATGCCTCCTCCTATGCCCCCTCTACTCATATTTCATCAAAGATTGATGAAAAAACTGGATCACATGGAGACTTGACTGGGGGTTCAGAATCTGTCAAAGCAAGTTGGGAAACGAAGTCCTTAAATTCACGAGGAAGATCAGATTTTGCAGCAGGTTCGGCCACGTATTCTGGTCCAAGTTTATCACCAAGTTCTTCACTTGGTTCACTGTCTTCAGACAAATCAACTCTGAATCCCTATGCAAAGGAATTTAAACTGAACCCTAATGCTAAGAGTTTTGTTCCGTCTCAAGCACCTGTTAGGCCTCGCTCTCCAGTGTCTGATGGTTCCTTCTATTACCCAGCTAACGTTTCTACTGTACCGAGTATGCCAACCATGCCAATGGGTGTCGGAGTTGGAACTTCTTTTGCCGGGCCACAGCCTATGATGTATAATCCACAAGTAGCACAAATGCCATCCCAACCATATTTTCATCAGAATGGACCACAGTATGGACAAATTCATGGTCATCCTAGACAAGTTCTATACATGCCCAATTACCTACCCGAGACGCCGCCGCCATATAAGGGACGTAACTATTAA 1836 0.4194 MNLQQVGQPKSSNGYGRRKSEKDGASKSDNKIPPGKSNAGRLASTGAVTSSKGGSYESPSRDRLVYLTTCLIGQQVEVQVKNGSIYSGIFHATNSEKDFGIILKMACLTKDGSSQGPSSGAEFVSKAPSKTLIIPGKELVQVIAKDVAVSTGDLASESHYDVHQEIMVDSVISQPRHVDLGRELHRWVPDENVPQCPELDNIFDGSWNSSRGWDQFETNKMLFGVKSTFDEELYTTKLEKGPRMRELELQALRIAREIEGEETQDIHLAEERGLYPDDFDIDEETRFSSVYRGKGVDDEYDENEDNFLDSQNSETFGDISDSVIKRPGKSSQSKTGGDGSYDHAKQLSSEVSGQSYSFSDVESRIQDNSVCDLIGANGNTKEENQTQAEDVQLSKYQDLKPAPNLKKDGSDKVGLTPTNASSYAPSTHISSKIDEKTGSHGDLTGGSESVKASWETKSLNSRGRSDFAAGSATYSGPSLSPSSSLGSLSSDKSTLNPYAKEFKLNPNAKSFVPSQAPVRPRSPVSDGSFYYPANVSTVPSMPTMPMGVGVGTSFAGPQPMMYNPQVAQMPSQPYFHQNGPQYGQIHGHPRQVLYMPNYLPETPPPYKGRNY 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03967 611 MobiDBLite consensus disorder prediction 414 432 - -
Vivi7g03967 611 MobiDBLite consensus disorder prediction 309 339 - -
Vivi7g03967 611 MobiDBLite consensus disorder prediction 376 393 - -
Vivi7g03967 611 Pfam Ataxin 2 SM domain 61 145 IPR025852 -
Vivi7g03967 611 MobiDBLite consensus disorder prediction 442 492 - -
Vivi7g03967 611 MobiDBLite consensus disorder prediction 345 360 - -
Vivi7g03967 611 MobiDBLite consensus disorder prediction 1 59 - -
Vivi7g03967 611 Pfam LsmAD domain 223 292 IPR009604 -
Vivi7g03967 611 MobiDBLite consensus disorder prediction 15 29 - -
Vivi7g03967 611 PANTHER ATAXIN 2-RELATED 34 605 IPR045117 GO:0003723
Vivi7g03967 611 Coils Coil 244 264 - -
Vivi7g03967 611 MobiDBLite consensus disorder prediction 376 492 - -
Vivi7g03967 611 MobiDBLite consensus disorder prediction 42 57 - -
Vivi7g03967 611 SMART LsmAD_2 223 293 IPR009604 -
Vivi7g03967 611 MobiDBLite consensus disorder prediction 290 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03967 Vivi-Chr7 105610971 105617268 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03967 - - gmx:100782491 811.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g03967 7 105610971 105617268 Vivi7g03967 7 105610971 105617268 ECH
Vivi2g07391 2 218156160 218165031 Vivi7g03967 7 105610971 105617268 PCT