Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07391 ATGAATTTGCAACCTGGGCAGTCTAAATCCTCTAATGGATATGGCCGTCGTAAATCTGACAGAGAAGGTGCAGCTAAGTTAGAGAATAAGATGCCATCTGAAAAATTAAATGCCAACAGATTGGCAAGCACAGGTGTGATTTATGGCATTAAAGGTGATAGTTACGGAAGTCCTTCACATGACCGACTAGTATATCTAACAACATGCCTAATTGGGCAGCAGGTGGAGGTCCAGGTGAAAAATGGGTCTATATACTCTGGAATATTTCATGCAACAAATACAGACAAAGATTTTGGAATCATTTTGAAAATGGCTCGCTTGACAAAGGACGCTTCTTCACAAAGGCAGAAGCCTGCTGCAGAATTTATCAGCAAGGCTCCTTCAAAGATTTTAATTATACCTGCCAAAGAACTTGTGCAAATTATAGCACAGGGTGTTGCTGTTACAAGTGATGGCCTACCTAGTGAACCTCACCATGATAGATATCAGGAAATCATGGTTGATTCATTGATATCTCAATCTCATCATGCTGAGCTAGGAAGAGAACTAAAACCCTGGGTACCTGATGAAGATGATCTACAATGCCCTGAACTGGAAAATATCTTTGATGGCCAGTGGAACAGGGGATGGGACCAGTTTGAAACAAATAAGGCACTGTTCGGGGTAAAAAGCACATTCAATGAGGAACTTTATACAACAAAGCTTGAAAAAGGTCCACAAACAAGAGAATTAGAAGTGCGGGCTTTAAGAATAGCAAGGGAAATCGAGGGTGAGGAAACTCGAGATCTTCATCTTGCTGAGGAAAGAGGTCTTCACTTTGATGAAGACTTTGATATTGACGAAGAAACAAGATTCTCTTCGGTCTATAGGGGTAAACATGTTGATGATACATATGAGGACAATGAAGATATACTGATCGATTCATACAATTCTGAGACTTTTTGTGGTAAATTCGGTTCAGTCGATGAGAGGTCTGGTGAAATAAATTGTGGAGAAGGCAATGATGGAGCTCATACACTGGCTACTTCCTCTCCCATGGATCACCAACAGTCATCTCAGTCAAGTACTGGTGTAGATTTAACCAGCACGCGTGCTTATGATCATGCTAAGCAGTTTGCGTCTGCAATCCCATCCAAAAGCTACTCGTCTTCGGATGTGGAAAGCAGGTTTCAGGAGAACCCGGTTCAAAATCTACGTGGAACCAGTGGTAACACCAAGGAAGAAAATCTACAATGTGAGGATGTTCAGCTGTCTAAATACGAGGATTCACAGACATCACTCTACTTGAAGAAGGACTTATCTCCTAATGCCAGCTCCTATGCCCCATCATCTCATATCTTAACAAAATCTCATGAGAAGATGGAATCCCCCGGGGATTTAGCATATGGCAAAGCTAATGGAGGAACAGAGTATATAAATTCACGCGGAGTCGGTGCATCATCTGGGTCAGATTCTGTGAGAGATGTGGCAGCATCTTCTGGTCCTGGTTTATCTCCAAGTTCATCTGTTGGTTCACTGTCTTCTGAAAAATCGTCTTTGAATCCCAATGCAAAGGAATTCAAGCCCAATCCTACGGCAAAGAATTTTATTCCATCACCTGCTCGTCCTTCCACTCCAGTGTCTGATAGTTCCTTCTATTTTCAACCTAATGTAACTACTGTACCAAATATGCAAGGCCTGCCCATGAGTATTGGGGCTGGACCCACTTTTACCGGACAACAACCTATCATGTATAATTCACAGGTTTCCCAAATGCCAACTCAAGCATATTTTCATCCAAATGCACCGCAGTACGGACAGCTTCATGGTCATCCTATGCAAGCTTTATACATGCCTAGTTACTTACCTGAAATGCCATACAATGGACGTGATTACTGA 1878 0.4212 MNLQPGQSKSSNGYGRRKSDREGAAKLENKMPSEKLNANRLASTGVIYGIKGDSYGSPSHDRLVYLTTCLIGQQVEVQVKNGSIYSGIFHATNTDKDFGIILKMARLTKDASSQRQKPAAEFISKAPSKILIIPAKELVQIIAQGVAVTSDGLPSEPHHDRYQEIMVDSLISQSHHAELGRELKPWVPDEDDLQCPELENIFDGQWNRGWDQFETNKALFGVKSTFNEELYTTKLEKGPQTRELEVRALRIAREIEGEETRDLHLAEERGLHFDEDFDIDEETRFSSVYRGKHVDDTYEDNEDILIDSYNSETFCGKFGSVDERSGEINCGEGNDGAHTLATSSPMDHQQSSQSSTGVDLTSTRAYDHAKQFASAIPSKSYSSSDVESRFQENPVQNLRGTSGNTKEENLQCEDVQLSKYEDSQTSLYLKKDLSPNASSYAPSSHILTKSHEKMESPGDLAYGKANGGTEYINSRGVGASSGSDSVRDVAASSGPGLSPSSSVGSLSSEKSSLNPNAKEFKPNPTAKNFIPSPARPSTPVSDSSFYFQPNVTTVPNMQGLPMSIGAGPTFTGQQPIMYNSQVSQMPTQAYFHPNAPQYGQLHGHPMQALYMPSYLPEMPYNGRDY 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07391 625 MobiDBLite consensus disorder prediction 434 541 - -
Vivi2g07391 625 MobiDBLite consensus disorder prediction 336 360 - -
Vivi2g07391 625 MobiDBLite consensus disorder prediction 1 32 - -
Vivi2g07391 625 Pfam LsmAD domain 220 290 IPR009604 -
Vivi2g07391 625 MobiDBLite consensus disorder prediction 327 360 - -
Vivi2g07391 625 MobiDBLite consensus disorder prediction 473 521 - -
Vivi2g07391 625 Pfam Ataxin 2 SM domain 60 144 IPR025852 -
Vivi2g07391 625 PANTHER ATAXIN 2-RELATED 35 620 IPR045117 GO:0003723
Vivi2g07391 625 Pfam Ataxin-2 C-terminal region 509 523 IPR009818 -
Vivi2g07391 625 MobiDBLite consensus disorder prediction 377 410 - -
Vivi2g07391 625 Gene3D - 67 137 - -
Vivi2g07391 625 SMART LsmAD_2 220 291 IPR009604 -
Vivi2g07391 625 MobiDBLite consensus disorder prediction 14 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07391 Vivi-Chr2 218156160 218165031 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07391 - - mtr:11435252 875.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g07391 2 218156160 218165031 Vivi2g07391 2 218156160 218165031 ECH
Vivi2g07391 2 218156160 218165031 Vivi7g03967 7 105610971 105617268 PCT