Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03804 ATGGAGAGAAATACCAAATCTCGTAGGCAACTTGTTGCAATGAAACAGTCTCTCTTTGACCAGGGATTACTTGATGAACAATTTATCCAACTAGAAGAATTACAAGATGATGCTAATCCTAACTTTGTCGAAGAAATTGTCACTCTTTACTACCGCGATTCACTTCGTCTTATTACAAGCATAGAACAAGCTTTAAAAGAGAGGAACATGTTGGATTTCAACAAACTAGACACCCTTATGCATCAGTTCACAGGAAGTAGTTCAAGCATTGGAGCCAAAAAGGTGAAAGCTGAGTGCAATCTCTTTAGGGAATATTGTAGTGCTGGAAATATTGAAGGATGCCTGAAGAGTTTTCATCAATTAAAAAAAGAATATGCTTCACTAAAAAAGAAGCTTGAAGCTTATTTTCAGTTGGCTAGGCAAGTTGGGGACTTGGAGGCAGAGTGTCACTCCAAGTGA 459 0.3813 MERNTKSRRQLVAMKQSLFDQGLLDEQFIQLEELQDDANPNFVEEIVTLYYRDSLRLITSIEQALKERNMLDFNKLDTLMHQFTGSSSSIGAKKVKAECNLFREYCSAGNIEGCLKSFHQLKKEYASLKKKLEAYFQLARQVGDLEAECHSK 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03804 152 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 39 135 IPR008207 GO:0000160
Vivi7g03804 152 PANTHER PHOSPHORELAY INTERMEDIATE PROTEIN YPD1 8 144 IPR045871 GO:0000160|GO:0009927|GO:0043424
Vivi7g03804 152 Gene3D HPT domain 2 149 IPR036641 GO:0000160
Vivi7g03804 152 Pfam Hpt domain 45 129 IPR008207 GO:0000160
Vivi7g03804 152 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 8 141 IPR036641 GO:0000160
Vivi7g03804 152 FunFam Histidine-containing phosphotransfer protein 4 1 147 - -
Vivi7g03804 152 Coils Coil 118 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03804 Vivi-Chr7 103927459 103928826 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03804 K14490 - gmx:100798055 252.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g03804 7 103927459 103928826 Vivi2g07975 2 229689276 229690407 ECH
Vivi7g03804 7 103927459 103928826 Vivi7g03804 7 103927459 103928826 ECH
Vivi2g07975 2 229689276 229690407 Vivi7g03804 7 103927459 103928826 PCT