Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07975 ATGGACAGAAACAATTCTCGCAGACAAGTTGCTGCAATGAAACAGTCACTCTTTGATCAGGGACTTCTTGATGAACAATTTATTCAACTTGAAGAACTGCAAGATGATGCTAATCCTAATTTTGTTGAGGAAATTGTGACTCTTTACTACCGCGATTCATCTAGGCTTATCTCTAACTTAGAACAGACACTGGAGAGGAATCCATTGGATTTCAACAAACTAGACACAATCATGCATCAGTTCAAAGGAAGCAGCTCAAGCATTGGAGCGAAAAAGGTGAAAGCAGAATCGACTCTAATTAGAGAATATTGCAGAACTGGAAATGCAGAAGGGTGTAGGAAGAGCTATCAACAAATGAAGAAAGAATATGTTGCATTGAGAAAGAAACTTGAAAATTATTTTCAACTAGCTAGGCAAGCTGGGCCTATTGAAAGAGCATGTCGCCCAAAATAA 453 0.3841 MDRNNSRRQVAAMKQSLFDQGLLDEQFIQLEELQDDANPNFVEEIVTLYYRDSSRLISNLEQTLERNPLDFNKLDTIMHQFKGSSSSIGAKKVKAESTLIREYCRTGNAEGCRKSYQQMKKEYVALRKKLENYFQLARQAGPIERACRPK 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07975 150 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 38 133 IPR008207 GO:0000160
Vivi2g07975 150 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 7 139 IPR036641 GO:0000160
Vivi2g07975 150 FunFam Histidine-containing phosphotransfer protein 4 1 145 - -
Vivi2g07975 150 Coils Coil 116 136 - -
Vivi2g07975 150 Gene3D HPT domain 1 145 IPR036641 GO:0000160
Vivi2g07975 150 Pfam Hpt domain 44 127 IPR008207 GO:0000160
Vivi2g07975 150 PANTHER PHOSPHORELAY INTERMEDIATE PROTEIN YPD1 6 142 IPR045871 GO:0000160|GO:0009927|GO:0043424
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07975 Vivi-Chr2 229689276 229690407 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07975 K14490 - gmx:100800310 259.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g03804 7 103927459 103928826 Vivi2g07975 2 229689276 229690407 ECH
Vivi2g07975 2 229689276 229690407 Vivi2g07975 2 229689276 229690407 ECH
Vivi2g07975 2 229689276 229690407 Vivi7g03804 7 103927459 103928826 PCT