Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03737 ATGAACGGTGGCGATGAGGGTGTTGTAGCTCCGGAGGAACCTTTGCAACCGTTGGAGTGGAAATTCTCGCAGGTTTTTGGCGAGCGTGCGGCTGGAGAGGAAGTTCAGGAAGTGGACATAATTTCTGCTATTGAATTCGACAAGTCTGGTGATCATCTTGCTACCGGTGATCGCGGTGGTCGAGTAGTTCTCTTTGAGCGGACAGATTCAAAAGATCATGGATCAAGAAAGGATTTGGAAAGTACCGACTATTCTAATAGTCGGCATCCTGAGTTCCGCTATAAAACCGAGTTTCAGAGTCACGAGCCTGAGTTTGACTATCTTAAGAGCTTGGAAATAGAAGAGAAAATTAACAAAATCAAATGGTGCCAAACAGCTAATGGTTCTGTATTCCTCCTATCTACAAATGACAAAACAATTAAATTTTGGAAGGTTCAAGAAAAGAAGGTGAAGAAAATTTCTGACATGAATATTGACCCTTCAAAAGCAAATGGAAATGGATCTATCGCAAGTTCGAGCAATTCTTGTATCCTTAAGCCACATCTTGCAAATGGAGGATCTTCAGATAAAACATATAGTTATCTAAGCAGTGATTTCTCATTTCCACCCGGAGGTTTACCGTCACTAAGATTACCCTCGGTAGCTAGCCATGAGACCAGTCTGTTGGCTCGATGTCGTAGAGTATACGCACATGCTCATGACTATCACATCAATTCTATTTCAAATAACAGCGATGGAGAAACTTTCATATCCGCCGATGATTTGAGAATAAATCTTTGGAACCTGGAAATTAGCAATCAAAGTTTTAATATTGTCGATGTAAAGCCTGCAAATATGGAGGATCTTACTGAGGTTATAACATCAGCTGAATTTCACCCGACACATTGTCATACATTGGCATATAGCAGTTCGAAGGGCTCAATTCGTCTTGTTGACTTGCGGCAGTCAGCCTTATGTGATTCCCATGCCAAATTATTTGAAGAACAGGAGGCCCCTGGATCCAGATCATTTTTCACAGAGATTATTGCTTCCATCTCGGATATAAAATTCGCAAGGGAGGGAAGATACATACTTAGTCGTGATTACATGTCTCTGAAGTTATGGGACATTAATATGGATTCTGGCCCGGTTTCAACATTCCGGGTTCACGAGTATTTAAGGCCAAAGCTATGTGATTTATACGAAAACGATTCAATTTTTGATAAGTTTGAGTGTTGTCTGAGTGGCGACGGATCCCGAGTTTCAACCGGTTCTTACAGCAATCTATTCCGAGTGTTTGGTTGCGCCCCGGGAAGTACAGAGGCGACAACTTTGGAAGCCAGCAAAAATCCAATGAGGCGACAAGTTCCAACACCATCTAGGCCTTCCAGATCAATCGGAAACAGCATCACAAGAGTCGTACGACGCGGAGCTGAAAACACCGGTGTCGATGCAAACGGAAACTCGTTCGACTTCACAACAAAGTTGCTACACTTAGCATGGCACCCGAGTGAAAATTCAATCGCCTGTGCTGCTGCAAATAGCTTATACATGTACTATGCATGA 1545 0.4265 MNGGDEGVVAPEEPLQPLEWKFSQVFGERAAGEEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDSKDHGSRKDLESTDYSNSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIKWCQTANGSVFLLSTNDKTIKFWKVQEKKVKKISDMNIDPSKANGNGSIASSSNSCILKPHLANGGSSDKTYSYLSSDFSFPPGGLPSLRLPSVASHETSLLARCRRVYAHAHDYHINSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCHTLAYSSSKGSIRLVDLRQSALCDSHAKLFEEQEAPGSRSFFTEIIASISDIKFAREGRYILSRDYMSLKLWDINMDSGPVSTFRVHEYLRPKLCDLYENDSIFDKFECCLSGDGSRVSTGSYSNLFRVFGCAPGSTEATTLEASKNPMRRQVPTPSRPSRSIGNSITRVVRRGAENTGVDANGNSFDFTTKLLHLAWHPSENSIACAAANSLYMYYA 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03737 514 ProSitePatterns Protein phosphatase 2A regulatory subunit PR55 signature 1. 104 118 IPR018067 -
Vivi7g03737 514 Gene3D - 215 320 IPR015943 GO:0005515
Vivi7g03737 514 Gene3D - 35 195 IPR015943 GO:0005515
Vivi7g03737 514 Gene3D - 321 510 IPR015943 GO:0005515
Vivi7g03737 514 SMART WD40_4 222 261 IPR001680 GO:0005515
Vivi7g03737 514 SMART WD40_4 272 312 IPR001680 GO:0005515
Vivi7g03737 514 SMART WD40_4 104 144 IPR001680 GO:0005515
Vivi7g03737 514 SMART WD40_4 31 66 IPR001680 GO:0005515
Vivi7g03737 514 ProSitePatterns Protein phosphatase 2A regulatory subunit PR55 signature 2. 231 245 IPR018067 -
Vivi7g03737 514 PIRSF PPA2_B55 10 514 IPR000009 GO:0000159|GO:0019888
Vivi7g03737 514 FunFam Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B 208 510 - -
Vivi7g03737 514 Pfam WD domain, G-beta repeat 225 261 IPR001680 GO:0005515
Vivi7g03737 514 FunFam Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B 36 196 - -
Vivi7g03737 514 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 346 373 IPR000009 GO:0000159|GO:0019888
Vivi7g03737 514 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 261 288 IPR000009 GO:0000159|GO:0019888
Vivi7g03737 514 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 318 345 IPR000009 GO:0000159|GO:0019888
Vivi7g03737 514 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 400 426 IPR000009 GO:0000159|GO:0019888
Vivi7g03737 514 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 233 260 IPR000009 GO:0000159|GO:0019888
Vivi7g03737 514 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 374 399 IPR000009 GO:0000159|GO:0019888
Vivi7g03737 514 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 289 317 IPR000009 GO:0000159|GO:0019888
Vivi7g03737 514 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 483 512 IPR000009 GO:0000159|GO:0019888
Vivi7g03737 514 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 45 65 IPR000009 GO:0000159|GO:0019888
Vivi7g03737 514 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 91 119 IPR000009 GO:0000159|GO:0019888
Vivi7g03737 514 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 120 148 IPR000009 GO:0000159|GO:0019888
Vivi7g03737 514 PANTHER PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B 16 514 IPR000009 GO:0000159|GO:0019888
Vivi7g03737 514 SUPERFAMILY WD40 repeat-like 39 506 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03737 Vivi-Chr7 103284029 103289731 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03737 K04354 - gmx:100799449 922.154
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g03737 7 103284029 103289731 Vivi2g08014 2 230208138 230215020 ECH
Vivi7g03737 7 103284029 103289731 Vivi7g03737 7 103284029 103289731 ECH
Vivi2g08014 2 230208138 230215020 Vivi7g03737 7 103284029 103289731 PCT