Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03699 ATGACGGACAAGAACCTTATCCACCCTCAAGCCAAGTCCACCACCAACGGCGGCGCAGCTGCCGTTAAGCCTTCATTCCCGGCGACAAAAGCGCAACTCTACGGTGCGTCCCGCCCAACCTACCGTCCTCAAACCCACCACCGTCCCCGTAGCAACCGTAATTGGTGTTGCACCATTTGTTGCTGGCTTATCCTCATCCTCATCTTCATCCTCCTCCTCCTCGGTGCCGCTGGCACCGTCGTTTACCTCCTCTACCACCCTCAACGTCCGTCCTTTTCCGTCACCTCCCTTAAACTCACCTCCTCCGAGTTTGACCTCACTCTCTCCACCACAAACCCAAACGACAAAATCACATTCTCTTACCAACCAATTTCTGTCTCTCTCCTCGCCGATGAACTCGACGTTGGTGACGGTGTTATTCCGTCGTTTGATCATGGAACGAAGAACACTACGATGCTGAAAGCTTTGGTTGAGAGAAGGAGTGTGAAGAGGAAATCATTGGAGCTGAAAATGAAGATGGAGACTAAGGTAGAGGCTAAGATGTGGGTTTTCAAAACGCCGCGTGTCGGAATCAGTGTGTTGTGTGACGGCATTGACGTTGCCGGCGAGAAAGCGGCGACGGCGGATGAGAAGTGTGCGGTGGATGTGAGGTTCAAGGTATGGAAATGGACTCTTGGATGA 681 0.5257 MTDKNLIHPQAKSTTNGGAAAVKPSFPATKAQLYGASRPTYRPQTHHRPRSNRNWCCTICCWLILILIFILLLLGAAGTVVYLLYHPQRPSFSVTSLKLTSSEFDLTLSTTNPNDKITFSYQPISVSLLADELDVGDGVIPSFDHGTKNTTMLKALVERRSVKRKSLELKMKMETKVEAKMWVFKTPRVGISVLCDGIDVAGEKAATADEKCAVDVRFKVWKWTLG 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03699 226 MobiDBLite consensus disorder prediction 1 21 - -
Vivi7g03699 226 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 24 205 - -
Vivi7g03699 226 SUPERFAMILY LEA14-like 71 160 - -
Vivi7g03699 226 Pfam Late embryogenesis abundant protein 107 193 IPR004864 -
Vivi7g03699 226 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03699 Vivi-Chr7 102905512 102906519 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03699 30 181 EF-hand Containing Proteins AT5G21130 26.061 9.58e-10 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03699 - - mtr:25500453 372.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g03699 7 102905512 102906519 Vivi7g03699 7 102905512 102906519 ECH
Vivi2g07335 2 217255194 217256417 Vivi7g03699 7 102905512 102906519 PCT