Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07335 ATGACAGATCGAGTATACCCCGCCGCCAAACCCGCCACCACCACCAACGGAAACGGCGTAACCACCGCCAACCCATCTTTCCCTGCCACAAAGGCCCAACTCTACGGCGCCTCTCGCCCAACCTACCGTCCTCAACCCCACCACCGCCGCACCCGCCGCCGTTGCTGCTGCACTTTCTTCTTCTACCTCCTCCTCATCCTCCTCATCCTCCTCCTCCTCATCGGCCTCACCGGCACCGCTTTCTACCTCATCTACCGCCCCCACCGTCCCACCTTCACCGTCACATCTCTCAAACTTTCCTACCTCAACCTCACATCCTCCTCATCTCTCAACTCAAAGTTCAACGTCAACATCACCGCCAAAAACCCCAACAAAGCCATCACCTTCGTTTACCAACCCACCTCAGTTCAAATCCTCTCCAACGAAATCGACGTCGGAAAAACAACAATCCCTTCTTTTAAACACGGCAAGAAGAACACAACTTTACTAAAAGCTTCCATTTTGAACAAAGGAGAGCCACTAGAAACCGACGCAGCCACAGAGTTGAAGAAAAACATGAAGAGCAAAAACGGGTTACCGTTGAAAGTGAAACTTGATACAAAAGTGAAGGCTAAATTGGGAAAATTGAAAACACCAAACGTCAGAATTAGAGTCTCTTGCGACGGAATCAGAGTTCATGTTCCCACCGGTAAGAAACCGGTGGCGGTAACGGCGTCAACGTCGAAGGTAAAGTGTGAAGTTGATGTGAGATTTAAGATCTGGAAATGGACCGTTTAA 777 0.5019 MTDRVYPAAKPATTTNGNGVTTANPSFPATKAQLYGASRPTYRPQPHHRRTRRRCCCTFFFYLLLILLILLLLIGLTGTAFYLIYRPHRPTFTVTSLKLSYLNLTSSSSLNSKFNVNITAKNPNKAITFVYQPTSVQILSNEIDVGKTTIPSFKHGKKNTTLLKASILNKGEPLETDAATELKKNMKSKNGLPLKVKLDTKVKAKLGKLKTPNVRIRVSCDGIRVHVPTGKKPVAVTASTSKVKCEVDVRFKIWKWTV 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07335 258 Pfam Late embryogenesis abundant protein 118 220 IPR004864 -
Vivi2g07335 258 MobiDBLite consensus disorder prediction 1 22 - -
Vivi2g07335 258 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 23 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07335 Vivi-Chr2 217255194 217256417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07335 49 220 EF-hand Containing Proteins AT5G21130 27.168 9.20e-19 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07335 - - mtr:11421488 325.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g07335 2 217255194 217256417 Vivi7g03699 7 102905512 102906519 PCT