Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03672 ATGACTATAGTCTCTACAATTTGGCTATTACCTCTCTTTACTTTCATTTATGTTAATGGTGTTCTTCCTATTGAAGCTACTCACCATGTTCATAGAGAACTTCAAAGTTTATCTTCTGATGAGTATTCTACAAATCAACCTTATAGAACTGGTTATCATTTTCAACCTCCAAAGAATTGGATAAATGATCCTAATGGTCCATTGCTTTACAAAGGAGTGTATCATTTATTCTATCAATACAACCCTAAAGGTGCACAATGGGGGAATATAGTATGGGCACATTCCATTTCAACTGATCTTATTAACTGGACCCCACTAGATCCAGCCATCTTTCCATCTCAACCGTCGGATATAAACGGTTGTTGGTCAGGATCAACCACAATCCTTCATGGTAACAAACCAGCAATACTATACACTGGAATCAACAAACTGAACCACCAAGTTCAAAATTTAGCATACCCTAAAGATTTCTCTGACCCTTTTCTTAGGGAATGGATTAAGTCACCACAAAATCCATTAATGGAACCAACTAATGAGAATAAAATCAATTCTAGTTCGTTCAGAGATCCAACTACTGGTTGGTTAGGAAAAGATGGAAAATGGAGGGTTCTTGTTGGAAGCAAAAGAAGAACAAGAGGGATTGCAATTTTGTATAAGAGTAAAGATTTTGTTGAATGGAAAAAATCTAAGCACCCTTTGCATTCAGCTAAGGGTACTGGAATGTGGGAGTGTCCTGATTTTTTTCCGGTGTTGAAAAATGGGATTAAGGGAGTTGATACGTCGTTGAATGATGAATCTGTTAGACATGTTCTTAAGGTTAGCTTGGATGACAAGAAACATGATTATTATTTAATTGGGAGTTATGACGAGGAAAAAGACAGGTTTGTCCCTGATAGAGGTTTTGAAGAGGTGGAGATTGAGGAGGTTTTTAGGTATGATTATGGGAAATATTATGCTTCGAAAACTTTCTTTGATTATGAGAAGAATAGAAGGGTGTTGCTTGGTTGGGTTAATGAATCTTCAAGTGTTGCTGATGATATTAAGAAAGGATGGTCTGGAATTCATACAATTCCAAGGACTATTTGGTTACATGAGTCAGGAAAACAGTTGGTACAGTGGCCAGTTGTAGAAATTGAGAAGCTGCGAGTAAATCATGTCAACTTGCCCACCAAACTTCTCAAGGGAGCTGAACTTCTGCAAATTAATGGTGTCACAGCATCACAAGCTGATGTTGAAATATCATTTGAAGTGAATAAGAATAACATTAGAGAGGCTGAAGTTTTGGAGAAATGGACAGACCCTCAAATTCTGTGTAGCCAAAAGGGTACATCAGTAAAAAGTGGTTTAGGGCCTTTTGGTTTGTTAGTTTTTGCTTCAAAGGGGTTGCATGAGTTCACATCAGTGTTCTTTAGAATATTCAGATTCCAAAACAAAAACTTGGTCCTCTTTTGTAGTGACCAAAGCAGGTCATCTTTGAATAAAGATAATGATTTGACTAGTTACGGGACTTTTATAGACGTGGATGTTCTTCATGAGAAGCTGTCATTGAGAACTTTGATTGATCACTCAGTGGTAGAGAGTTTTGGTGGAGAAGGAAGGGCATGCATTACAGCTAGAGTTTATCCAACATTGGCTATCAATGATAAGGCACTTATTTATGCTTTCAATAATGGAACTACTGACATCAAGATCACAAGTTTGAATGCTTGGAGCATGAAGAAAGCACAGTTAAATGGAAAATTATAA 1746 0.3706 MTIVSTIWLLPLFTFIYVNGVLPIEATHHVHRELQSLSSDEYSTNQPYRTGYHFQPPKNWINDPNGPLLYKGVYHLFYQYNPKGAQWGNIVWAHSISTDLINWTPLDPAIFPSQPSDINGCWSGSTTILHGNKPAILYTGINKLNHQVQNLAYPKDFSDPFLREWIKSPQNPLMEPTNENKINSSSFRDPTTGWLGKDGKWRVLVGSKRRTRGIAILYKSKDFVEWKKSKHPLHSAKGTGMWECPDFFPVLKNGIKGVDTSLNDESVRHVLKVSLDDKKHDYYLIGSYDEEKDRFVPDRGFEEVEIEEVFRYDYGKYYASKTFFDYEKNRRVLLGWVNESSSVADDIKKGWSGIHTIPRTIWLHESGKQLVQWPVVEIEKLRVNHVNLPTKLLKGAELLQINGVTASQADVEISFEVNKNNIREAEVLEKWTDPQILCSQKGTSVKSGLGPFGLLVFASKGLHEFTSVFFRIFRFQNKNLVLFCSDQSRSSLNKDNDLTSYGTFIDVDVLHEKLSLRTLIDHSVVESFGGEGRACITARVYPTLAINDKALIYAFNNGTTDIKITSLNAWSMKKAQLNGKL 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03672 581 Pfam Glycosyl hydrolases family 32 C terminal 377 571 IPR013189 -
Vivi7g03672 581 Gene3D Glycosyl hydrolase domain; family 43 57 384 IPR023296 -
Vivi7g03672 581 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 57 386 - -
Vivi7g03672 581 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 386 572 - -
Vivi7g03672 581 Pfam Glycosyl hydrolases family 32 N-terminal domain 53 374 IPR013148 -
Vivi7g03672 581 CDD GH32_Fruct1-like 59 363 - -
Vivi7g03672 581 ProSitePatterns Glycosyl hydrolases family 32 active site. 53 66 IPR018053 GO:0004553|GO:0005975
Vivi7g03672 581 SUPERFAMILY Arabinanase/levansucrase/invertase 43 375 IPR023296 -
Vivi7g03672 581 Gene3D - 385 572 - -
Vivi7g03672 581 SUPERFAMILY Concanavalin A-like lectins/glucanases 374 574 IPR013320 -
Vivi7g03672 581 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 41 577 - -
Vivi7g03672 581 SMART glyco_32 53 532 IPR001362 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03672 Vivi-Chr7 102549725 102554528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03672 68 578 Glycoside Hydrolase AT3G13790 63.969 0.0 678
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03672 K01193 - gmx:547681 937.562
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g07346 2 217419899 217422923 Vivi7g03672 7 102549725 102554528 PCT