Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07346 ATGAGATATGGAGGATTTTATCATCTATTTTACCAATATAACCCTAAAGGTGCTGTATGGGGAAATATAGTGTGGGCCCATTCAGTCTCAAAAGATCTTGTTAACTGGACACCATTGGATCATGCAATCCATCCTTCTCAACCGTCAGATATAAAAGGTTGTTGGTCAGGTTCAGCAACAATTCTCCCAGGTGGAAAACCAGCAATTTTATATACAGGAATTGATCCAAATAATCACCAAGTTCAAAACATAGCCATACCTAAAAACATGTCTGACCCATTACTTAGAGAATGGAAAAAATCACCAAAAAATCCATTAATGGAACCAACTTTAGCTAATAAAATTAATTCAAGTTCATTTAGAGACCCAACTACATCTTGGCTAGGAAAAGATGGATTTTGGAGGGTACTGATTGGTAGCAAAATTGATACAAAAGGAATGGCAATTTTGTACAAAAGTAAAAATTTTGTTGATTGGGTTGAAGCAAAACATCCTTTGCATTCAATTGAAGGAACAGGAATGTGGGAGTGTCCTGATTTTTATCCTGTTTTGGATAAGAATTTGGATGAGAATTTGTTAAGAATTGGTGTTGATACTTCTATGAATGGGGATGATGTTAGACATGTTCTTAAGGTTAGTTTGGATGATACAAAACATGATCATTATTTGATTGGGAGTTATGATGTTGTTAAGGATGTTTTTGTTCCGGAAAATGGATTTGATAAGGATAATGGATTTGTTTTGAGATATGATTATGGGAAATATTATGCGTCGAAAACGTTTTTCGATGATGGGAAGAATAGAAGGATTTTGTTGGGTTGGGTTAATGAATCTTCGAGTGTGGCTGATGATGTCAAGAAAGGTTGGTCGGGGATTCATACTATTCCAAGGGAAATTTGGCTTCATAAATCTGGGAAACAATTGGTACAATGGCCGGTGAAGGAACTTGAAAATCTTCGTATAAATCCGATTAATTGGCCTATCAAGGTGATTAAAGGAGGTGAAATCATTCCAATTTCTGGTGTTAACTCAGTACAGGCTGATGTTGAAATTTCATTTGAAATAAGTGATTTTGGAAAGGTAGAATCATTGAGCCAAATGATTGATCCTCAAATTCTGTGTAGTCAAAAGGGTGCAGGAGTAAAAGGTGGTGTTGGGCCATTTGGTTTGTTAGTATTTGCTTCTCAAGGTTTTAAAGAATACACAGCAGTGTTTTTTAGAATATTCAAATACCAACATAAGAATTTGGTTCTCATGTGCAGTGACCAAAGCAGGTCATCTTTGAATAAGGATAATGATATGACTAGTTATGGCACTTTTGTGGATGTTGACCCTCTTCATGAAAAGTTGTCATTAAGAACTTTGATTGATCATTCAGTGGTGGAAAGTTTTGGGGGTGAAGGAAGGGCATGCATCACAGCAAGAGTTTATCCTACATTAGCAATTCATGATAAGGCTATGTTATATGCTTTCAACAATGGAACTTCTGCAGTCAAAATCACAAGTTTGAGTGCATGGACTATGAAGAAAGCAAAGATCAACTGA 1545 0.3592 MRYGGFYHLFYQYNPKGAVWGNIVWAHSVSKDLVNWTPLDHAIHPSQPSDIKGCWSGSATILPGGKPAILYTGIDPNNHQVQNIAIPKNMSDPLLREWKKSPKNPLMEPTLANKINSSSFRDPTTSWLGKDGFWRVLIGSKIDTKGMAILYKSKNFVDWVEAKHPLHSIEGTGMWECPDFYPVLDKNLDENLLRIGVDTSMNGDDVRHVLKVSLDDTKHDHYLIGSYDVVKDVFVPENGFDKDNGFVLRYDYGKYYASKTFFDDGKNRRILLGWVNESSSVADDVKKGWSGIHTIPREIWLHKSGKQLVQWPVKELENLRINPINWPIKVIKGGEIIPISGVNSVQADVEISFEISDFGKVESLSQMIDPQILCSQKGAGVKGGVGPFGLLVFASQGFKEYTAVFFRIFKYQHKNLVLMCSDQSRSSLNKDNDMTSYGTFVDVDPLHEKLSLRTLIDHSVVESFGGEGRACITARVYPTLAIHDKAMLYAFNNGTSAVKITSLSAWTMKKAKIN 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07346 514 Pfam Glycosyl hydrolases family 32 C terminal 339 506 IPR013189 -
Vivi2g07346 514 SUPERFAMILY Concanavalin A-like lectins/glucanases 312 510 IPR013320 -
Vivi2g07346 514 Pfam Glycosyl hydrolases family 32 N-terminal domain 2 312 IPR013148 -
Vivi2g07346 514 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 1 513 - -
Vivi2g07346 514 CDD GH32_Fruct1-like 1 301 - -
Vivi2g07346 514 SMART glyco_32 1 468 IPR001362 GO:0004553|GO:0005975
Vivi2g07346 514 Gene3D - 323 508 - -
Vivi2g07346 514 SUPERFAMILY Arabinanase/levansucrase/invertase 2 313 IPR023296 -
Vivi2g07346 514 Gene3D Glycosyl hydrolase domain; family 43 1 322 IPR023296 -
Vivi2g07346 514 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 1 324 - -
Vivi2g07346 514 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 324 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07346 Vivi-Chr2 217419899 217422923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07346 1 514 Glycoside Hydrolase AT3G13790 62.452 0.0 658
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07346 K01193 - gmx:100776791 891.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g07346 2 217419899 217422923 Vivi7g03672 7 102549725 102554528 PCT