Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03247 ATGGAAGCTCTCAACGGATTCCGATTATGTGTTATTTCCGTTCTCATTTTTCTCACTACTCTTACTCAAACCTTAAGCTCAACTGCATTTCATGACACTCAAAATGAAGACTGGGAGAGCTATGTTAGTATACCAAACACCATCTTAACTTATGGGAGTGAAATGGAGGAGGCTGAATGGCAGATGGTGCAAAAGAAAGGAAACCAATTTGTAGTGAATGGACAACCATTTTACGTAAACGGATTCAACACTTACTGGATGATGGTATTTGCCGCCGATGAGTCCACAAGAGGAAAGGTCACTGATGTGTTCAAACATGCATCCTCTGTTGGTATGTCAGTTTGTAGGACTTGGGCCTTCAATGATGGTCAGTGGAGAGCCCTTCAGAAATCTCCATCAGTTTATGATGAAGAGGTGTTCAAGGCTCTGGATTTTGTAGTGAGTGAAGCAAAGAAATACAGAATCAGACTCATATTATCATTGGTTAACAATTGGGACTCATATGGTGGAAAAGCACAATATGTCAAGTGGGGTAATGCTGCTGGCCTTAACTTGACCTCGGATGATGACTTTTTTTCACATCCAACCCTCATAGGCTACTACAAGGACCATGTTAAGACGGTACTCAATAGAGTTAACACATTCACAAATATCACTTATAAGGATGATCCAACTATTTTTGCTTGGGAATTAATGAATGAACCTCGATGCACCTCTGATTCCTCGGGTGATAAGTTACAGGAATGGATACAAGAGATGGCATTCTATGTGAAAAGTGTTGATCCAAAACACCTAGTGGAGATTGGCCTAGAAGGATTTTATGGACCCTCAACACCTCAAAGATTTCAGTTCAACCCAAATACACTTGCTCAACAAGTTGGAACTGATTTTATAAGAAACCACCAGGTTCTAGGCGTCGATTTCGCTTCTGTTCACATATATCCAGACTCTTGGATTTCACAATCAGTTGATGATAGCCATATCCCATTTGTGAAGTCATGGATGGAATCCCACATAGATGACGCTGAAAAGTATCTTGGAATGCCAGTTGTTTTTGGTGAGTTTGGTGTATCTGCAAAAGATCCAGGTTATAATTCAACATATAGAGATACACTTATAAACACAGTTTACAAGACAATTCTAAACTCAACAAAGAAAGGAGGTAGTGGTGCTGGAAGCCTTTTGTGGCAGTTCTTTCCAGATGGAACGGATTACATGGACGACGGTTACGCAATTGTTCTCTCAAAAGCTCCTTCAACTTCAAGCATGATATCTCTTCAATCCACAAGGCTTGCTCTATTCAACTCCCTATGCTCTGAGAGATGTCATTGGGGTTGTAACAAGAAAAAAGTGTTGCAAAAAGTACTCTATCACGACGATGAGCTTTAA 1389 0.4032 MEALNGFRLCVISVLIFLTTLTQTLSSTAFHDTQNEDWESYVSIPNTILTYGSEMEEAEWQMVQKKGNQFVVNGQPFYVNGFNTYWMMVFAADESTRGKVTDVFKHASSVGMSVCRTWAFNDGQWRALQKSPSVYDEEVFKALDFVVSEAKKYRIRLILSLVNNWDSYGGKAQYVKWGNAAGLNLTSDDDFFSHPTLIGYYKDHVKTVLNRVNTFTNITYKDDPTIFAWELMNEPRCTSDSSGDKLQEWIQEMAFYVKSVDPKHLVEIGLEGFYGPSTPQRFQFNPNTLAQQVGTDFIRNHQVLGVDFASVHIYPDSWISQSVDDSHIPFVKSWMESHIDDAEKYLGMPVVFGEFGVSAKDPGYNSTYRDTLINTVYKTILNSTKKGGSGAGSLLWQFFPDGTDYMDDGYAIVLSKAPSTSSMISLQSTRLALFNSLCSERCHWGCNKKKVLQKVLYHDDEL 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03247 462 Gene3D Glycosidases 60 434 - -
Vivi7g03247 462 FunFam Mannan endo-1,4-beta-mannosidase 6 59 435 - -
Vivi7g03247 462 PANTHER - 11 452 IPR045053 GO:0004553
Vivi7g03247 462 Pfam Cellulase (glycosyl hydrolase family 5) 73 376 IPR001547 GO:0004553|GO:0071704
Vivi7g03247 462 SUPERFAMILY (Trans)glycosidases 62 416 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03247 Vivi-Chr7 97731041 97733838 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03247 6 460 Glycoside Hydrolase AT5G01930 67.834 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03247 K19355 - gmx:100801139 786.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g02440 6 106031612 106033699 Vivi7g03247 7 97731041 97733838 PCT