Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03226 ATGTCTGGGCTGTATAATCCTAACAACAACAACAACAACTTCTCTCCGGTGAGAGCCGCTTCTCCTCAGATTAGACCCACGGTACCTTCAGACATGGACAGCCAGTATCTTTCCGAGTTGCTTGCGGAGTATCAGAAGCTTGGACCCTTTATCAAAATTCTTCCCAACTCAAGTCGTCTCTTGAATCAAGAAATATTAAGAGTTTCTGGAATGTTGTCCAATCAAGGTTTTGGAGACTTAGACAGACTACGGCACAGAAGCCCTAGTCCCATGGCTTCTTCAAACCTGATGTCAAATGTCACTGGAACAGGGATGGGTGGATGGAATAGTTTTCAGCAGGAGAGAATATGTGGAGCTCCTGGACTGGCAATGGACTGGCAAGGCACGCCGGCAAGTCCTAACTCATACAATATAAAAAGGATTTTGCGCTTGGAAATTCCTGTTGATACATACCCCAATTTCAATTTTGTTGGAAGACTCCTGGGGCCTAGAGGAAATTCTCTGAAACGGGTAGAAGCTACTACAGGATGCAGGGTGTTTATTAGAGGACAGGGATCAATAAAGGATCCAGACAAGGAAGAAAAATTGAAAGGAAGACCTGGATATGAGCATCTCAATGAGCCACTCCACATATTGATTGAGGCTGATTTACCCGCTAATATTGTTGACATGAAGCTTAGGCAGGCTCGGGAAATTATAGAGGAATTGCTAACACCTGTGGATGAGTCAGAGGACTTCATAAAGAGGCAGCAGTTGCGGGAATTGGCATTGCTGAATTCAAATTTTAGAGAAGAGAGTCCTGGGCCAAGCGGCAGTGTATCTCCGTTTAATTCTAGTGGAACAAGTGGAATGAAGCGAGCAAAAACGGGTAGATGA 876 0.4463 MSGLYNPNNNNNNFSPVRAASPQIRPTVPSDMDSQYLSELLAEYQKLGPFIKILPNSSRLLNQEILRVSGMLSNQGFGDLDRLRHRSPSPMASSNLMSNVTGTGMGGWNSFQQERICGAPGLAMDWQGTPASPNSYNIKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGQGSIKDPDKEEKLKGRPGYEHLNEPLHILIEADLPANIVDMKLRQAREIIEELLTPVDESEDFIKRQQLRELALLNSNFREESPGPSGSVSPFNSSGTSGMKRAKTGR 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03226 291 Gene3D K Homology domain, type 1 29 269 IPR036612 GO:0003723
Vivi7g03226 291 SMART kh_6 138 238 IPR004087 GO:0003676
Vivi7g03226 291 MobiDBLite consensus disorder prediction 1 20 - -
Vivi7g03226 291 Pfam Homodimerisation region of STAR domain protein 32 79 IPR032377 -
Vivi7g03226 291 MobiDBLite consensus disorder prediction 263 291 - -
Vivi7g03226 291 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 145 263 IPR036612 GO:0003723
Vivi7g03226 291 ProSiteProfiles Type-1 KH domain profile. 155 212 - -
Vivi7g03226 291 PANTHER RNA-BINDING PROTEIN RELATED 25 284 IPR045071 -
Vivi7g03226 291 MobiDBLite consensus disorder prediction 1 28 - -
Vivi7g03226 291 Pfam KH domain 155 187 IPR004088 GO:0003723
Vivi7g03226 291 MobiDBLite consensus disorder prediction 261 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03226 Vivi-Chr7 97414176 97423332 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03226 K14945 - gmx:100797384 468.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g02472 6 106551971 106556823 Vivi7g03226 7 97414176 97423332 PCT