Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02658 ATGGAATCTCCACAATCTGTTGTGTCACCATTGAAGATCTCTGTCATGGAAGATGCTGAGAAGTACAAATCTGATGTTTTGACAAAAACCTCAAGTCCTTTATCTAAGGACATTGAAGTCAACAGAAAAGAAGCTCTTGCAATGTCTAATCACGACGACGAATTCGTTGGAGTAGTTGATGTTTACATTCATCAGGCTAGAGACATTCATAACATCTGCATATACCACAAACAAGATGTTTATGCTAAGATTTGTTTAACTAGCGATCCGGAGAATTCCGTCTCTACCAAAATCATCAACGGAGGAGGAAGGAACCCCGTGTTTAACGATAATCTTCGTCTGAGCGTTAGGACGGTCGAGTCTTCTCTCAAATGTGAGATATGGATGCTTAGCAGGGTGACGAATTATCTCGAAGATCAGTTACTTGGTTTTGCTTTGGTGCCTTTGTGTGAAATTTTGATGAAAGACGGGAAATTAGAGAAAGAGTTCTCTCTTTCTTCGACCGATCTATTCCATTCGCCCGCAGGTTTTGTGCGATTATCTCTCTCGTACGCTGGCGTTTCACCTGATGTTATGGTGGTTTCTTCGAGGCCTAATGTTGAACTGGACAAAAACAGAACTGAGAATGACTTAGAAATACGCGAGTCATTCGTGAGAGATTTAGATAAAATCGAGTTCCCGGATCCAAAAATTGCAAGTGAATACCATTTAATGGTTTCAGAATACTTTGGCGCCGATACTTTGGCCACTTCTGATACTGAAAGTCTCGGTTCCGAAAGAGGTGTTCAATTTGTAGAAAGCTTATCAGCATCTAGTTTTGAATCTAATCAACCAGCTAAGGCTGAATCGAATGGAGTTTTCTCTCTTTCACCGTCTGCAAGCTCAAACGAGCGAGAGAAATGCGTTGATGTCAAAGACGGTGAGCGTGATTCGTCAAACACGTTGCTGAATGAGTCATTTCAGAAACCTGTTGCGAGTGTGAATATCGAGCCAGAACCAAAGATGGTGCAGCAGGATATAGTAGACATGTACATGAAAAGTATGCAGCAATTTACCGAGTCACTAGCGAAAATGAAACTTCCTATGGACTTTGAAAATGGACCAACTAGTTCAGGAAACTCGAGCTCCCAACGGAATCTACAATCATCGAAGAGTAGTAACTCGCGCGTATTTTACGGTAGCAGAGCTTTCTTCTAA 1197 0.416 MESPQSVVSPLKISVMEDAEKYKSDVLTKTSSPLSKDIEVNRKEALAMSNHDDEFVGVVDVYIHQARDIHNICIYHKQDVYAKICLTSDPENSVSTKIINGGGRNPVFNDNLRLSVRTVESSLKCEIWMLSRVTNYLEDQLLGFALVPLCEILMKDGKLEKEFSLSSTDLFHSPAGFVRLSLSYAGVSPDVMVVSSRPNVELDKNRTENDLEIRESFVRDLDKIEFPDPKIASEYHLMVSEYFGADTLATSDTESLGSERGVQFVESLSASSFESNQPAKAESNGVFSLSPSASSNEREKCVDVKDGERDSSNTLLNESFQKPVASVNIEPEPKMVQQDIVDMYMKSMQQFTESLAKMKLPMDFENGPTSSGNSSSQRNLQSSKSSNSRVFYGSRAFF 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02658 398 SMART C2_3c 58 161 IPR000008 -
Vivi7g02658 398 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 52 187 IPR035892 -
Vivi7g02658 398 MobiDBLite consensus disorder prediction 275 314 - -
Vivi7g02658 398 Gene3D C2 domain 52 208 IPR035892 -
Vivi7g02658 398 ProSiteProfiles C2 domain profile. 42 163 IPR000008 -
Vivi7g02658 398 MobiDBLite consensus disorder prediction 275 297 - -
Vivi7g02658 398 MobiDBLite consensus disorder prediction 362 387 - -
Vivi7g02658 398 MobiDBLite consensus disorder prediction 298 312 - -
Vivi7g02658 398 Pfam C2 domain 58 163 IPR000008 -
Vivi7g02658 398 MobiDBLite consensus disorder prediction 366 387 - -
Vivi7g02658 398 PANTHER EXPRESSED PROTEIN 3 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02658 Vivi-Chr7 90440604 90442574 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02658 - - vvo:131617797 766.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g02658 7 90440604 90442574 Vivi7g02658 7 90440604 90442574 ECH
Vivi3g05404 3 111149315 111151944 Vivi7g02658 7 90440604 90442574 PCT