Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02204 ATGGAACCTTTCAACACCATGTTCTTAGCATTTTTTCTTCTCTTGGTTTCTTTAGCCAATGCCAAAGTTCAAGAACACGAATTCGTTGTTCAAGAAACTCCAGTGAAGAGGCTGTGCAACACACATATGAGTATTACTGTAAATGGACAATTTCCTGGTCCAACTTTGGAAGTTAATAATGGAGATACTTTGGTTGTTAAAGTCGTTAACAAAGCTCGTTATAATGTCACCATTCACTGGCATGGAGTTAGGCAGATCAGAACAGGGTGGGCTGATGGGCCGGAATTCGTGACACAATGTCCTATTCGTCCTGGAGGAAGTTACACCTACAGGTTTACCATTCAAGGACAGGAAGGTACACTTTGGTGGCATGCTCATAGTTCATGGCTTAGAGCCACGGTTTATGGAGCTCTAATCATTCATCCAAAGGAGGGCGACGATTATCCTTTCACTAAGCCAAAGCGCGAAACACCTATTCTTCTAGGGGAATGGTGGGATGCAAACCCTATTGATGTTGTGAGACAAGCAACACAAACAGGAGCTGCTCCAAATATATCTGATGCATACACTATCAATGGTCAACCTGGTGATCTTTACAAGTGTTCTTCTCAAGGCACAACAATTGTTCCAATAGATTCAGGAGAAACAAATCTCATAAGAGTAATCAATGCAGCATTAAACCAACCACTTTTCTTCACAATTGCAAACCACAAATTAACAGTAGTAGGTGCTGATGCTTCTTATGTTAAACCATTCACAACCAATGTCCTTATGTTAGGACCTGGCCAAACCACTGATGTTCTCATCAACGGCGACCAACCACCATCACGATACTACATCGCAGCTCGCGCTTACCAATCCGCTCAAAACGCTGCGTTCGATAACACAACGACGACCGCAATTCTCGAATACAAATCATCACCATGTCCTGCAAAGGGTGGTGCAAATATCAAACCTATTATGCCTTCATTACCAAACTACAATGACACAAACACTGTTACATCCTTTAGTAAAAGTTTCAGAAGTTTAAGAAAAGTTGAAGTTCCTTATGAAGTTGATGAAGATCTTTTCTTTACTATTGGATTAGGACTCAACAAATGTCCATCAAATTTCAATTCGAACCAATGTCAAGGACCGAACGGGACGCGGTTCACTTCAAGTATGAACAATGTGTCTTTTGTACTACCAAACAAGTTTTCAATCCTGCAGGCTCATAAACTTGGAGTGCAAGGCATCTTTACGACCGATTTTCCCACGAAACCGCCTGTGAAATTTGATTACACCGGTAACGTGAGTCGGTCGCTGTGGCAACCGATTCAAGGGACTAAAGTTACTAAGTTGAGATTTGGATCAAGGGTTCAGATTGTTTTGCAGGATACTAGTATTGTTACTCCTGAGAATCACCCTATTCATCTTCATGGTTATGATTTTTATATTGTTGCTGAGGGTTTTGGAAACTTTGATCCTAAGAAAGATGCTTCCAAATTTAACCTTGTTGATCCACCTATGAGGAACACTGTTGCTGTACCTGTTAACGGTTGGGCAGTTATCAGATTTGTAGCTGATAATCCAGGTGTTTGGATTATGCATTGTCACTTGGATGTTCATATTGGATGGGGTTTGGCAACTGTGTTCTTGGTAGAGGATGGAGAAGGGCTATTGGAATCCATAGAAGCTCCTCCAGAGGATTTGCCTCTATGTTAG 1704 0.4143 MEPFNTMFLAFFLLLVSLANAKVQEHEFVVQETPVKRLCNTHMSITVNGQFPGPTLEVNNGDTLVVKVVNKARYNVTIHWHGVRQIRTGWADGPEFVTQCPIRPGGSYTYRFTIQGQEGTLWWHAHSSWLRATVYGALIIHPKEGDDYPFTKPKRETPILLGEWWDANPIDVVRQATQTGAAPNISDAYTINGQPGDLYKCSSQGTTIVPIDSGETNLIRVINAALNQPLFFTIANHKLTVVGADASYVKPFTTNVLMLGPGQTTDVLINGDQPPSRYYIAARAYQSAQNAAFDNTTTTAILEYKSSPCPAKGGANIKPIMPSLPNYNDTNTVTSFSKSFRSLRKVEVPYEVDEDLFFTIGLGLNKCPSNFNSNQCQGPNGTRFTSSMNNVSFVLPNKFSILQAHKLGVQGIFTTDFPTKPPVKFDYTGNVSRSLWQPIQGTKVTKLRFGSRVQIVLQDTSIVTPENHPIHLHGYDFYIVAEGFGNFDPKKDASKFNLVDPPMRNTVAVPVNGWAVIRFVADNPGVWIMHCHLDVHIGWGLATVFLVEDGEGLLESIEAPPEDLPLC 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02204 567 Pfam Multicopper oxidase 156 306 IPR001117 -
Vivi7g02204 567 ProSitePatterns Multicopper oxidases signature 2. 530 541 IPR002355 GO:0005507
Vivi7g02204 567 SUPERFAMILY Cupredoxins 18 169 IPR008972 -
Vivi7g02204 567 Gene3D - 24 153 IPR008972 -
Vivi7g02204 567 FunFam Laccase 154 346 - -
Vivi7g02204 567 Pfam Multicopper oxidase 417 550 IPR011706 GO:0005507|GO:0016491
Vivi7g02204 567 CDD CuRO_3_LCC_plant 412 550 IPR034289 GO:0005507
Vivi7g02204 567 NCBIfam laccase 21 567 IPR017761 GO:0046274|GO:0048046|GO:0052716
Vivi7g02204 567 Gene3D - 154 346 IPR008972 -
Vivi7g02204 567 CDD CuRO_1_LCC_plant 26 142 IPR034288 GO:0005507
Vivi7g02204 567 FunFam Laccase 12 142 - -
Vivi7g02204 567 SUPERFAMILY Cupredoxins 350 567 IPR008972 -
Vivi7g02204 567 Pfam Multicopper oxidase 30 144 IPR011707 GO:0005507
Vivi7g02204 567 CDD CuRO_2_LCC_plant 158 304 IPR034285 -
Vivi7g02204 567 SUPERFAMILY Cupredoxins 150 343 IPR008972 -
Vivi7g02204 567 ProSitePatterns Multicopper oxidases signature 1. 525 545 IPR033138 -
Vivi7g02204 567 Gene3D - 369 567 IPR008972 -
Vivi7g02204 567 PANTHER MULTI-COPPER OXIDASE 25 552 IPR045087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02204 Vivi-Chr7 84859656 84862599 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02204 K05909 - gmx:100796956 1056.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04356 3 78396053 78399001 Vivi7g02204 7 84859656 84862599 PCT