Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04356 ATGGAGTGTGTCAAAACAAATTCAAAATATTCTTCCATTTTTATAGCCATTTTTGTTCTCTTATTATCTTCTGCTTATTCTTTAGCAAATGCCAAAGTTCACGAGCATGAGTTTCTTGTTGAAGCTACTCCAGTGAAGAGGCTGTGCAAAACTCATAACTCCATTACTGTGAATGGACAATACCCAGGTCCAACTTTGGAGATTAATAATGGTGACACTTTGGTTGTGAAAGTCACTAACAAAGCTCGTTATAATGTGACCATTCACTGGCATGGTGTTCGACAAATGAGGACAGGATGGGCAGATGGTCCGGAATTCGTGACACAATGTCCTATTCGTCCTGGTGGGAGTTACACCTACCGTTTCACTGTTGATGGACAAGAAGGGACACTTTGGTGGCATGCTCATAGTTCATGGCTTAGAGCTACTGTTTATGGTGCTTTAATCGTTCGTCCTAGGGAAGGAGAACCCTTCCCTTTTCCTAAGCCACACCGCGAATCAACCATTCTCTTAGGCGAATGGTGGGACAAAAATCCTATAGATGTTCTGAGGGAATCCCAAAGAACTGGAGCAGCTCCTAATATTTCTGATGCATATACCATCAATGGTCAACCTGGTGATCTTTACAAGTGCTCTACCAAAGGAACAACAATAGTTCCAATACAATCTGGCAAGACAAATCTCGTCAGAGTGATCAATGCCGCACTCAACCAACCACTTTTCTTTACAATCGCCAATCATAAACTAACCGTGGTTGGCGCTGACGCCTCTTACCTTAAACCTTTCACTACTAGTGTCCTCATGTTAGGACCGGGCCAAACAACTGACGTCTTATTAACGGCCAACCAACCACCTTCTCGCTACTACATTGCAGCACGCGCATACCAATCAGCTCAAAACGCACCATTTGATAACACAACCACCACAGCCATTCTCCAATACAACAACAGCTCAATCAAAAACAAACCAATCATGCCACCACTCCCCGCTTACAACGACACCAACACGGTTACTAAGTTCAGTAGAAGCTTTTTTAGTCCAAGAAAAGTTGAAGTCCCGGCGGAAATCGATGAAAATCTCTTTTTCACAATTGGTTTAGGCCTCAACAATTGCCCGAAAAATTTCAGGAATAGAAGATGTCAAGGTCCAGTTAACCGGACACGCTTCACTGCGAGCATGAACAATGTTTCTTTTACTCTTCCAAACAATATCTCAATTTTGCAGGCTCATTATAACGGAATCCCCGGAGTTTTCACCACAGATTTTCCCGCGAAACCGCCCGTGAAATTCGATTACACCGGTAACGTGAGCCGTTCGCTTTGGCAACCTATTCCAGGGACTAAAGCTTATAAGTTGAAGTTTGGATCAAGGGTTCAGATTGTGTTGCAGGATACAAGTATTGTCACTCCAGAGAATCATCCAATTCACCTTCATGGATATGATTTCTACATTGTTGCTGAAGGTTTTGGAAACTTTGATCCCAAGAAAGATACTAAAAAATTCAACCTTATTGATCCACCTCAGAGGAATACAGTGGCTGTACCGGTCAACGGTTGGGCCGTTATCCGGTTTGTTGCAGATAACCCAGGTGCTTGGATTATGCATTGTCACTTGGATGTTCACATAGGTTGGGGTTTGGCTACTATTCTATTGGTAGAAGATGGAGTTGGGAAATTGCAATCTATAGAACCACCTCCACTAGACCTACCTCTATGTTAG 1719 0.4299 MECVKTNSKYSSIFIAIFVLLLSSAYSLANAKVHEHEFLVEATPVKRLCKTHNSITVNGQYPGPTLEINNGDTLVVKVTNKARYNVTIHWHGVRQMRTGWADGPEFVTQCPIRPGGSYTYRFTVDGQEGTLWWHAHSSWLRATVYGALIVRPREGEPFPFPKPHRESTILLGEWWDKNPIDVLRESQRTGAAPNISDAYTINGQPGDLYKCSTKGTTIVPIQSGKTNLVRVINAALNQPLFFTIANHKLTVVGADASYLKPFTTSVLMLGPGQTTDVLLTANQPPSRYYIAARAYQSAQNAPFDNTTTTAILQYNNSSIKNKPIMPPLPAYNDTNTVTKFSRSFFSPRKVEVPAEIDENLFFTIGLGLNNCPKNFRNRRCQGPVNRTRFTASMNNVSFTLPNNISILQAHYNGIPGVFTTDFPAKPPVKFDYTGNVSRSLWQPIPGTKAYKLKFGSRVQIVLQDTSIVTPENHPIHLHGYDFYIVAEGFGNFDPKKDTKKFNLIDPPQRNTVAVPVNGWAVIRFVADNPGAWIMHCHLDVHIGWGLATILLVEDGVGKLQSIEPPPLDLPLC 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04356 572 PANTHER MULTI-COPPER OXIDASE 33 557 IPR045087 -
Vivi3g04356 572 Pfam Multicopper oxidase 167 316 IPR001117 -
Vivi3g04356 572 ProSitePatterns Multicopper oxidases signature 2. 535 546 IPR002355 GO:0005507
Vivi3g04356 572 CDD CuRO_1_LCC_plant 36 152 IPR034288 GO:0005507
Vivi3g04356 572 Pfam Multicopper oxidase 40 154 IPR011707 GO:0005507
Vivi3g04356 572 SUPERFAMILY Cupredoxins 352 572 IPR008972 -
Vivi3g04356 572 FunFam Laccase 164 349 - -
Vivi3g04356 572 CDD CuRO_2_LCC_plant 168 314 IPR034285 -
Vivi3g04356 572 FunFam Laccase 22 152 - -
Vivi3g04356 572 SUPERFAMILY Cupredoxins 160 347 IPR008972 -
Vivi3g04356 572 ProSitePatterns Multicopper oxidases signature 1. 530 550 IPR033138 -
Vivi3g04356 572 NCBIfam laccase 31 572 IPR017761 GO:0046274|GO:0048046|GO:0052716
Vivi3g04356 572 SUPERFAMILY Cupredoxins 28 179 IPR008972 -
Vivi3g04356 572 Gene3D - 36 161 IPR008972 -
Vivi3g04356 572 Gene3D - 376 572 IPR008972 -
Vivi3g04356 572 Gene3D - 164 349 IPR008972 -
Vivi3g04356 572 CDD CuRO_3_LCC_plant 417 555 IPR034289 GO:0005507
Vivi3g04356 572 Pfam Multicopper oxidase 422 554 IPR011706 GO:0005507|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04356 Vivi-Chr3 78396053 78399001 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04356 K05909 - gmx:547704 1043.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04356 3 78396053 78399001 Vivi7g02204 7 84859656 84862599 PCT