Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02184 ATGGAAATTACACAAGAAGAACCCTCTCCTTCCAACTCTCACACTCCAAACTCCACCAACACCAACACCGACGCACAAAACAACAACAACCCCATCGACGACGAAGAAGATGAAGACGAAGAAGAATACGAAAACGACGACGAAGACGAACCGAATCACCAAATCCCTCAATCCGTAGAATCCAAATTACGCGAGCAACGTTTCCGAGTGGAAGCCTTTTCCCGTCGATTAACAACGGAACTAGTCCCAATCCGAGTCCACGACGTGATAATCAACGGAAACACGAAGACTAAGGATTGGATAATCGAAGCCGAACTTAATGGAATCGAGAAAGCCACTACAATGCAGGAGCTCATGCAAGCTTCGCAAATCGCTATCTCAAGGCTTCAAGGGCTTGAAATCTTTGATTCTTGCAATGTTAAGCTCGAAGCTGGACCTCGAGAATTGCCAGGCACGGCGAATGTTATCGTCGATGTTGTTGAGACTGATAGCAAACTTTCTGGTGGATTTGGAGTTTATATGAAACCCTCGGTTAATACATGGACTTCCGAAGGAACTGTTAAGTATAAGAATATTTTTGGTTATGGTGATATATGGGATGCTTCTTTAGCCTATGGTGGCAGCCAAGCGACAGAGGTGAGCTTAGGGGTGTATGCCCCTCGCCTCAAAGGGTTTTTAACTCCTCTTGTGGCACGGATGTTCATGCTTTCTCAAGATTGGCAGGAGTTTTCATCGTACAAAGAGCAGTTGTTAGGCATGTCTCTTGACTTGATTTCAACAAAGCACCAGGACTTAGTGTACACTCTTGGATGGCGTACCTTAACGGATCCGTCACAAATGGCATCAAAATCTGTAAGGAGACAGCTGGGCCATGGGTTACTATCGGCTTTGAAGTATACATTAAAATTTGATAGGAGAGATTCGCCTATTAGGCCTACAAAAGGATATGCTTTCGTTTCCACCACTCACTTGGGTGGTCTTACACCGGATCACCGGAGCTCGCGGTTTCTGCGCCAGGAGTTTGATGCTCGCCTTGCTGTCCCTTTTGGATTTTATAATACAGCACTGAACCTTGGCATATCTGCTGGGGCTGTGTTTCCATGGGGGCAAGGGTTCAGGACCAAGCCATCTCCCCTTCCCGAAAGGTTTTATTTGGGTGGTGATTTTTCTCCAGTTTGCACCCTAGGAGGACCAGCAACATTATGGGGATTTAAAACTAGAGGAGTAGGCCCTACTGAACTGCGGAGGCAAAGAAGAGATGAATCAAATGATGACAGTGGTGATTCGTCTACGCGTGACTTCATTGGAGGAGATCTTGCTGTTACTGCCTTTGCAGACCTCTCTTTTGACCTTCCTATTAGGTGGTTGAGAGAGCAAGGAATACATGGTCACGTTTTTGCTGGTACTGGGAATACTGCTAAACTAACTCAGGGCGAATACATGCATTTTTCTCCACGGAAGTTCTTAGATTCCTTTCGACTGTCTGTCGGATGTGGAATTGTTATTCCTACTAGACTCTTCCGCTTGGAGGTTAACCACTTCCACATTCTTAGGAAGGATGAGCATGATCGTGGGAAGACTGGATTTAAGTTCAGCTTCTCAGCTCCTATGTAG 1614 0.4585 MEITQEEPSPSNSHTPNSTNTNTDAQNNNNPIDDEEDEDEEEYENDDEDEPNHQIPQSVESKLREQRFRVEAFSRRLTTELVPIRVHDVIINGNTKTKDWIIEAELNGIEKATTMQELMQASQIAISRLQGLEIFDSCNVKLEAGPRELPGTANVIVDVVETDSKLSGGFGVYMKPSVNTWTSEGTVKYKNIFGYGDIWDASLAYGGSQATEVSLGVYAPRLKGFLTPLVARMFMLSQDWQEFSSYKEQLLGMSLDLISTKHQDLVYTLGWRTLTDPSQMASKSVRRQLGHGLLSALKYTLKFDRRDSPIRPTKGYAFVSTTHLGGLTPDHRSSRFLRQEFDARLAVPFGFYNTALNLGISAGAVFPWGQGFRTKPSPLPERFYLGGDFSPVCTLGGPATLWGFKTRGVGPTELRRQRRDESNDDSGDSSTRDFIGGDLAVTAFADLSFDLPIRWLREQGIHGHVFAGTGNTAKLTQGEYMHFSPRKFLDSFRLSVGCGIVIPTRLFRLEVNHFHILRKDEHDRGKTGFKFSFSAPM 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02184 537 Pfam Omp85 superfamily domain 191 534 IPR000184 GO:0019867
Vivi7g02184 537 PANTHER SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER 23 533 IPR039910 -
Vivi7g02184 537 MobiDBLite consensus disorder prediction 1 29 - -
Vivi7g02184 537 Gene3D membrane protein fhac: a member of the omp85/tpsb transporter family 173 535 - -
Vivi7g02184 537 MobiDBLite consensus disorder prediction 412 428 - -
Vivi7g02184 537 FunFam Outer membrane OMP85 family protein 83 162 - -
Vivi7g02184 537 MobiDBLite consensus disorder prediction 30 49 - -
Vivi7g02184 537 MobiDBLite consensus disorder prediction 412 431 - -
Vivi7g02184 537 MobiDBLite consensus disorder prediction 1 62 - -
Vivi7g02184 537 FunFam Outer membrane OMP85 family protein 173 535 - -
Vivi7g02184 537 Gene3D membrane protein fhac 83 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02184 Vivi-Chr7 84557802 84562675 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02184 K07277 - gmx:100802876 843.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g02184 7 84557802 84562675 Vivi7g02184 7 84557802 84562675 ECH
Vivi3g04332 3 77939976 77943455 Vivi7g02184 7 84557802 84562675 PCT