Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02138 ATGACATTACCCTTGTCACATTACTTCATATATACCGGCCACAATTCCTATCTAACCGGAAATCAGCTGAGCAGTGACTGCAGCGACGTTCCAATCATAAATGCATTGAAGAGAGGTGTAAGAGTTATTGAGTTGGACATATGGCCTAATGCTTCAAAGGATAACGTTGATGTTCTTCACGGAAGGACACTGACAACTCCGGTAGAGCTCATTAGATGTTTGAGGTCTATTAAGGAACATGCCTTTGTCGCATCAGAATATCCGGTCGTAATAACGCTAGAAGACCATCTTACTCCAGATCTTCAGGCTAAAGTAGCTGAGATGGTCACTGAAACGTTCGGAGACATACTATTTGTTCCTGGCTCGGAAAGTTTGAAGGAATTTCCTTCTCCGGAATCACTTAAAAAGAGGATTATTATATCAACCAAACCACCTAAAGAGTATCTTGAGACGAAAGAAGTAAAGGAAAAAGAAGATGATTCATTGCATGGAAAGGCTTCGGGTGATGATGAAGCTTGGGGGAAGGAGGTCCCGAGCTTCAAGTGTGTTTCTATATCCGATTACAAGGGAGTCCATTTGGATAAAGAAGATATTCACGACGAGGAAGATCTTGATGAATCGGATAAATCACATCATCATATAGCTCCAGAATATAAAGGTTTAATTGCCATTCATGCTGGGAAGTCAAAAGGAGGTATAGAAGCATGGCTCAAAGTCGATCCGGAGAAAGCGAGGCGTATAAGTTTAAGTGAGCAGCAACTTGAAAAGGCTGTTATAACTCATGGAAAAGAAATTGTCAGGTTTACTCAGAAGAATATTCTGAGGGTGTTTCCGAAAGGTACTCGCATTGACTCGTCGAATTATAACCCATTAATTGGTTGGGTTCATGGAGCTCAAATGGTTGCATTCAACATGCAGGGATATGGGAGATCACTTTGGTTGATGCATGGTATGTTCAGAGCCAATGGAGGATGTGGTTATGTTAAAAAACCTGATTTTCTCTTAACGACCGGTCCGGATAACAAGGTATTCGATCCTAAAGCTAAGTTACCCGTGAAGACTACTTTGAAGGTGACTGTATACATGGGAGAAGGATGGTATTACGATTTCAAGCATACACACTTCGATCAATATTCACCTCCCGATTTCTATACAAGAGTTGGGATTGCGGGAGTCCCGAATGATAGTATAATGAAAAAAACAAAGGCAATAGAGGACAATTGGTTGCCTACATGGAACGAGGTATTCGAGTTTCCGCTTACCGTTCCAGAACTAGCCCTACTTCGCATAGAAGTCCACGAGTACGACATGTCTGAGAAAGACGACTTTGGTGGCCAGACATGCCTACCTGTTTCGGAGTTAAGAAGCGGCATTCGAGCAGTTTCACTTCATAGCCAGAAGGGAGATAAATACAACTCTGTAAAGCTTCTTATGCGCTTTGAATTTTATTAA 1452 0.4174 MTLPLSHYFIYTGHNSYLTGNQLSSDCSDVPIINALKRGVRVIELDIWPNASKDNVDVLHGRTLTTPVELIRCLRSIKEHAFVASEYPVVITLEDHLTPDLQAKVAEMVTETFGDILFVPGSESLKEFPSPESLKKRIIISTKPPKEYLETKEVKEKEDDSLHGKASGDDEAWGKEVPSFKCVSISDYKGVHLDKEDIHDEEDLDESDKSHHHIAPEYKGLIAIHAGKSKGGIEAWLKVDPEKARRISLSEQQLEKAVITHGKEIVRFTQKNILRVFPKGTRIDSSNYNPLIGWVHGAQMVAFNMQGYGRSLWLMHGMFRANGGCGYVKKPDFLLTTGPDNKVFDPKAKLPVKTTLKVTVYMGEGWYYDFKHTHFDQYSPPDFYTRVGIAGVPNDSIMKKTKAIEDNWLPTWNEVFEFPLTVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELRSGIRAVSLHSQKGDKYNSVKLLMRFEFY 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02138 483 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 355 482 IPR035892 -
Vivi7g02138 483 Gene3D C2 domain 350 483 IPR035892 -
Vivi7g02138 483 SMART C2_3c 355 463 IPR000008 -
Vivi7g02138 483 PRINTS Phospholipase C signature 30 50 IPR001192 GO:0035556
Vivi7g02138 483 PRINTS Phospholipase C signature 127 144 IPR001192 GO:0035556
Vivi7g02138 483 PRINTS Phospholipase C signature 294 312 IPR001192 GO:0035556
Vivi7g02138 483 PRINTS Phospholipase C signature 449 459 IPR001192 GO:0035556
Vivi7g02138 483 PRINTS Phospholipase C signature 4 22 IPR001192 GO:0035556
Vivi7g02138 483 PRINTS Phospholipase C signature 273 294 IPR001192 GO:0035556
Vivi7g02138 483 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 1 482 IPR001192 GO:0035556
Vivi7g02138 483 Pfam Phosphatidylinositol-specific phospholipase C, X domain 1 143 IPR000909 -
Vivi7g02138 483 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 1 143 - -
Vivi7g02138 483 SMART plcy_3 218 335 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Vivi7g02138 483 SMART plcx_3 1 143 IPR000909 -
Vivi7g02138 483 Gene3D Phosphatidylinositol (PI) phosphodiesterase 1 348 IPR017946 GO:0006629|GO:0008081
Vivi7g02138 483 FunFam Phosphoinositide phospholipase C 350 483 - -
Vivi7g02138 483 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 245 333 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Vivi7g02138 483 SUPERFAMILY PLC-like phosphodiesterases 2 346 IPR017946 GO:0006629|GO:0008081
Vivi7g02138 483 CDD C2_PLC_like 353 483 - -
Vivi7g02138 483 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 248 334 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Vivi7g02138 483 ProSiteProfiles C2 domain profile. 336 465 IPR000008 -
Vivi7g02138 483 Pfam C2 domain 356 457 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02138 Vivi-Chr7 83565014 83568416 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02138 1 482 Acyl Lipid Metabolism Gene Families AT3G55940 71.370 0.0 693
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02138 K05857 - gmx:100037460 875.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04306 3 77170837 77174377 Vivi7g02138 7 83565014 83568416 ECH
Vivi7g02138 7 83565014 83568416 Vivi7g02138 7 83565014 83568416 ECH
Vivi3g04306 3 77170837 77174377 Vivi7g02138 7 83565014 83568416 PCT